Gene
| Gene Model ID | pfu_aug2.0_1298.1_28192 |
|---|---|
| Locus | scaffold1298.1 : 127524 ... 132715 : - |
| To GenomeBrowser | scaffold1298.1:127524..132715 |
| Genes list of scaffold | scaffold1298.1 |
| Synonym | pfu_aug1.0_1004.1_15308 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1298.1_28192.t1 | 1 | 1 | Tetraspannin | 7 | 263 | 5.8e-38 | 130.3 | 1.10002e-41 | 8.2e-38 | 129.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1298.1_28192.t1 | gi|642937660|ref|XP_008198889.1| | PREDICTED: tetraspanin-1 isoform X1 [Tribolium castaneum] | 4.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_1298.1_28192.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1298.1_28192.t1 atggggtgtgggaattgctgctcaaaatgtttcctgattttcttcaacctcatatttatgatgttcggaggaggtttact ggggataggtatctttatcctggtcagtaagaacgacattttggtattgaccaggagcgtagatacctccaatctagatg tcccctccctcatagagaaagccgcctatgctatcatagcgggaggggctttcatattcatcgtggccttccttggatgc tgcggggcttgtagaaagagcaaaggaatgctgtgtacatatgctatcgtcgttggattaattctagcattggaaatagc agcagttgtcatggcaatcgtttataagagtgacttcgagaaatttgcaaaggacaacctgacaaacttgttggagacca gatacattggtccttacgatttctctgacgtcatcagtctggcctttgacctggtccacattttgtttggttgctgcggg gtaacttccggtgcacaattcgccaatatttcaagctggaatacgacatatgcgtacgacgacggaagcggaagttacgt cgtcgccactgcggttataccagcgacttgttgtgacttttcaaacgatgatgcttttccaaatgacatcaccaattttc tgctgtccatgacaaatacgacatgtcctgtgacaaaagccaactcttattatgaaaaaggatgttacgatgagctgtac aatgcattcagtacttactttaacattgttattggatttggagcaagcgttggagcactcgagaatatctgtacgatggg gaactacttctcatggcgtagcagacgacttctagatcacggcgtggttcgcctctag |
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Protein
| Protein ID | pfu_aug2.0_1298.1_28192.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1298.1_28192.t1 MGCGNCCSKCFLIFFNLIFMMFGGGLLGIGIFILVSKNDILVLTRSVDTSNLDVPSLIEKAAYAIIAGGAFIFIVAFLGC CGACRKSKGMLCTYAIVVGLILALEIAAVVMAIVYKSDFEKFAKDNLTNLLETRYIGPYDFSDVISLAFDLVHILFGCCG VTSGAQFANISSWNTTYAYDDGSGSYVVATAVIPATCCDFSNDDAFPNDITNFLLSMTNTTCPVTKANSYYEKGCYDELY NAFSTYFNIVIGFGASVGALENICTMGNYFSWRSRRLLDHGVVRL |
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