Gene
| Gene Model ID | pfu_aug2.0_1299.1_31602 |
|---|---|
| Locus | scaffold1299.1 : 138846 ... 161380 : + |
| To GenomeBrowser | scaffold1299.1:138846..161380 |
| Genes list of scaffold | scaffold1299.1 |
| Synonym | pfu_aug1.0_9881.1_31843 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1299.1_31602.t1 | 2 | 1 | Gal_Lectin | 11 | 89 | 7.2e-26 | 90.3 | 9.7e-30 | 7.2e-26 | 90.3 |
| pfu_aug2.0_1299.1_31602.t1 | 2 | 1 | C8 | 32 | 46 | 3.1e-13 | 49.7 | 0.35 | 2600.0 | -1.3 |
| pfu_aug2.0_1299.1_31602.t1 | 2 | 2 | C8 | 105 | 182 | 3.1e-13 | 49.7 | 4.2e-17 | 3.1e-13 | 49.7 |
| pfu_aug2.0_1299.1_31602.t1 | 2 | 2 | Gal_Lectin | 109 | 123 | 7.2e-26 | 90.3 | 0.54 | 4000.0 | -1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1299.1_31602.t1 | gi|156382746|ref|XP_001632713.1| | predicted protein [Nematostella vectensis] | 2.0e-24 |
| pfu_aug2.0_1299.1_31602.t1 | gi|156350222|ref|XP_001622194.1| | predicted protein [Nematostella vectensis] | 2.0e-24 |
| pfu_aug2.0_1299.1_31602.t1 | gi|156367534|ref|XP_001627471.1| | predicted protein [Nematostella vectensis] | 2.0e-24 |
| pfu_aug2.0_1299.1_31602.t1 | gi|156350236|ref|XP_001622201.1| | predicted protein [Nematostella vectensis] | 3.0e-24 |
Transcript
| Transcript ID | pfu_aug2.0_1299.1_31602.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1299.1_31602.t1 atggtaatatgtgagcataaaagcaatacaatatcatgtccagctggtcatctgatcaagatcgcatctgctaactatgg tcgtactagcaaaggaacttgtcggagcagctcaaaccgtgacaccaattgcaaagcttcaaaaagtttgagcatcgtca agtctttttgtgatggaaacaatgcctgctcactcgaagcaacgaatagtgtatttggagatccgtgtgtaggaacctat aaataccttacagtggtctacaattgctataaatcagagggaccagaaaactgttcgccagtgttactcaaggaggcaaa agcagcttgccaagttatcaattctaaattttctgagtgcaccaagcatgatcctgatctggcagaggaattctttgaca actgcttgtatgattattgtgcttatgtaggaaaggtatcaaaagacgagcttgaaaaagtcgtgtgcaatgctattgaa ggatttgcggaattttgtaaagaaataggaataacaccaagatggaggaggaagaatttctgtcaatatcactggtcatt ctggaaagagggatctgatatgctttctaaaggaacatcttaa |
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Protein
| Protein ID | pfu_aug2.0_1299.1_31602.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1299.1_31602.t1 MVICEHKSNTISCPAGHLIKIASANYGRTSKGTCRSSSNRDTNCKASKSLSIVKSFCDGNNACSLEATNSVFGDPCVGTY KYLTVVYNCYKSEGPENCSPVLLKEAKAACQVINSKFSECTKHDPDLAEEFFDNCLYDYCAYVGKVSKDELEKVVCNAIE GFAEFCKEIGITPRWRRKNFCQYHWSFWKEGSDMLSKGTS |
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