Gene
| Gene Model ID | pfu_aug2.0_130.1_00290 |
|---|---|
| Locus | scaffold130.1 : 190398 ... 209752 : - |
| To GenomeBrowser | scaffold130.1:190398..209752 |
| Genes list of scaffold | scaffold130.1 |
| Synonym | pfu_aug1.0_2568.1_37325 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_130.1_00290.t1 | 1 | 1 | Pep_M12B_propep | 67 | 191 | 8.1e-15 | 54.7 | 3.3e-18 | 1.7e-14 | 53.7 |
| pfu_aug2.0_130.1_00290.t1 | 9 | 1 | TSP_1 | 450 | 499 | 1.5e-26 | 92.2 | 2.5e-13 | 1.2e-09 | 38.0 |
| pfu_aug2.0_130.1_00290.t1 | 9 | 2 | TSP_1 | 540 | 577 | 1.5e-26 | 92.2 | 0.48 | 2400.0 | -1.3 |
| pfu_aug2.0_130.1_00290.t1 | 9 | 3 | TSP_1 | 670 | 687 | 1.5e-26 | 92.2 | 8.6e-06 | 0.042 | 13.9 |
| pfu_aug2.0_130.1_00290.t1 | 9 | 4 | TSP_1 | 733 | 760 | 1.5e-26 | 92.2 | 6.2e-05 | 0.31 | 11.1 |
| pfu_aug2.0_130.1_00290.t1 | 9 | 5 | TSP_1 | 794 | 847 | 1.5e-26 | 92.2 | 2.7e-07 | 0.0013 | 18.7 |
| pfu_aug2.0_130.1_00290.t1 | 9 | 6 | TSP_1 | 857 | 898 | 1.5e-26 | 92.2 | 6.2e-06 | 0.031 | 14.4 |
| pfu_aug2.0_130.1_00290.t1 | 9 | 7 | TSP_1 | 924 | 979 | 1.5e-26 | 92.2 | 1.7e-05 | 0.084 | 13.0 |
| pfu_aug2.0_130.1_00290.t1 | 9 | 8 | TSP_1 | 987 | 1042 | 1.5e-26 | 92.2 | 7.6e-06 | 0.038 | 14.1 |
| pfu_aug2.0_130.1_00290.t1 | 9 | 9 | TSP_1 | 1052 | 1071 | 1.5e-26 | 92.2 | 0.00013 | 0.64 | 10.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_130.1_00290.t1 | gi|731280796|ref|XP_010609175.1| | PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 3 isoform X2 [Fukomys damarensis] | 0.0 |
| pfu_aug2.0_130.1_00290.t1 | gi|676479946|ref|XP_009061905.1| | hypothetical protein LOTGIDRAFT_127898 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_130.1_00290.t1 | gi|504173465|ref|XP_004596301.1| | PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 3 [Ochotona princeps] | 0.0 |
| pfu_aug2.0_130.1_00290.t1 | gi|395509901|ref|XP_003759225.1| | PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 14 [Sarcophilus harrisii] | 0.0 |
| pfu_aug2.0_130.1_00290.t1 | gi|554822750|ref|XP_005922063.1| | PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 3-like [Haplochromis burtoni] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_130.1_00290.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_130.1_00290.t1 atggaaacttgtcaaaggaggggatctccaacacaactaggttgcagaccccacagcaaatctccaaaacacccaatgca aaaacacagtagacacgcgcagaaagagacacaaaagatatacctatcaagcagtatttacatcgcagatgaatcaaaat caacaatacgatgtctgaacgagcaagtgaagatcattgtcccttttatctcaaacgaaaacggagagtacctagatgac atttccatgaaacaagtcaacattgatgatgatactgatattgaggttgagtatccagactctgtctatgtgactattcc aatagagggatatgggatcattttgaagctttggaagcgtttgatccataccagcaaacgggagaaggtctttgagaagg acaataccacatacatggagatatacgatgatgattgttattatcagggatatgtgacagatgataggactaccttcgct gcagtttcactctgtaacggtttgagaggatatatgcaaacagacaagtatcagatatctgtgcaaccaaaggaagcttc tgttaccggaaataacaacgcttatcattttgccagattgtgtgaaaagcagtcaggttcgcaccctcgagattcaatac aaattgataggaagaagcgtcaagccaacaaaaaattcctagaagttttacttgcagcagatactagcgttgtcaaattt gttggaaaagacgtaatagaaaattaccttctgtcgctgatgaacatagtaaatgatgtttataagcataatacactaac tccggacatagaggttatcactgtaaagctcctactgattgacagtagaacagagaaaacaatcgtagtaagaaacgatg ccagacaaacggttgatcgattttgtaattgggcaactattcaagcttataacaacagataccacggagggggacataac tttgacgtcgccgtgtacctcaccagaacaaacctaggacctgcagaggttaagagagcgtggatatataatcgaatatt cgggacactaacatgtttggataacgacccttcaaaaagtctggacccatctcaagatccaataggacaaatgttctcag caagccaacagtgtagatacgagttcggagagacccacgaattatgtagaaatttcaacggcaacttttgtccgatgtta tggtgcgcagataggagaagaccacatctgtgtaaaacgaaaaggggaccaccactaaatggcaccaaatgtggcactga aaggtggtgtatgggaggatcgtgtgtttattatggaaacaacaaagcggttgatggacaatggggaggatggacacagt ggtctaactgctccgctgattgtggtatagggcttaaacagaggactcgtaactgtgataaccctaaaccggagtatggt ggcaaggactgcacgggaataacatctgaaattaacacatgtaaagctgctgactgtaccacatacactgatggtagaaa attacaatgcaccgtcctggactctctccctattcgcagaagatcccatacatggcttccatatcaagcaaagaaccgta aagactactgtgtgcttacctgtatatctaaccggaccaaagaaatagccacctttgacgacatccccgtggacaacgga acaccctgctcttacgacgaacctaacaatatatgtgtagatggagaatgtatacaagtcggttgtgacggtgtccgtaa ttccacagtaagagaggatcgatgtggggtttgtgacggagacgactctacctgtaaagaagtatcggggatgttcaaga aaaaacttccctatacaggaaggggacgtgagtacgcggaggtcatcgtattaccaaaaggagctcgacacattgccatc aaggagactgcaacttctccacatttcctcgtccctaatgacgattatacctacgaacagatgttatacgagtacaggta tgacggatggacagaatgcagcgtctcgtgtggtataggatcccaacagttgatatattattgctatgacaaggcgactg gtgaaaaagtggataatgatacgaaatgtctgtttttggagaaacctgaaactaaccctgtaaaatgtgaaaggataaat tgcaatgccgaaacgttccaatgggcccttttagtttcttggagcgattgcagctcagcgtgcggaaatgacggctatca ataccaagaatatagatgtgaacgggatgtcggaaatgggaactacgaggccgtgtccttcgacttgtgcaattttgttc ccgcgccaaattacacgcggccttgtaatagaatcccgtgctctgatgtgaaatggattccaactgatgaatggagtgcg tgttcggaaagttgcggaacaaatggactaaaaacaaagatttacgaatgcgtcgattctcaatcaaatcatctgagtga agagaattgcaaagatctgtttaaacccgaggcaacggaaaagtgcaataggaaagcgtgtataaaggagtggtatagac tagaatctacgaaccaatggggagagtgttcggccagttgcgggtgggaagggttagcaattagagtttatgaatgcaag aaaataaattcaaacgacgaagtcgaagttgttgacgtagaaaattgcgaatcttacgaaggcgacaaggaaatgagacc gtgtaataggaaggcatgcagtaatgggtactatgactggattcagctgtctgattggtcggaatgttcatctttatgtg gtgagacaggtatacaatatcaagagtatggttgtttcgaaataagctcagcacaagatgtccaccctatgaacgctagt ttctgtgaaggacctgaccactctaatgtcacacgaccttgtaatagagttccatgttatacattccagtggatcccgac atcatggggagagtgtacctctatttgtggtgatgatggtatacagcatagaatttatacctgtgagaaggagtatgtca atggctccttagaggccgtgggtgacaatttttgtaatggtataaaacatccaaatgattcacaagagtgtaataggaga ccatgtttctcatacacatgggtcatgtccccaaactggacagaatgcacagccacgtgtggtgacgatggagtacaatt tcagaaatatagttgttttattcattatgtcaatgattcaatgatttcggcaagtgataacgaagactgtaaaaatttag atactccacttataagtagagattgtaataggatagactgtgctcatatcaatggagtaaagcgtttgactggggttctt gtactactacgtgcggaaatgacggtatacaaactaaaattaaatgttccgtttcctgtggaatgggtatccagtcccgt caggtttactgcagtgatacctctagaactgttagtaactcattatgctccagatccgcacctgtaa |
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Protein
| Protein ID | pfu_aug2.0_130.1_00290.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_130.1_00290.t1 METCQRRGSPTQLGCRPHSKSPKHPMQKHSRHAQKETQKIYLSSSIYIADESKSTIRCLNEQVKIIVPFISNENGEYLDD ISMKQVNIDDDTDIEVEYPDSVYVTIPIEGYGIILKLWKRLIHTSKREKVFEKDNTTYMEIYDDDCYYQGYVTDDRTTFA AVSLCNGLRGYMQTDKYQISVQPKEASVTGNNNAYHFARLCEKQSGSHPRDSIQIDRKKRQANKKFLEVLLAADTSVVKF VGKDVIENYLLSLMNIVNDVYKHNTLTPDIEVITVKLLLIDSRTEKTIVVRNDARQTVDRFCNWATIQAYNNRYHGGGHN FDVAVYLTRTNLGPAEVKRAWIYNRIFGTLTCLDNDPSKSLDPSQDPIGQMFSASQQCRYEFGETHELCRNFNGNFCPML WCADRRRPHLCKTKRGPPLNGTKCGTERWCMGGSCVYYGNNKAVDGQWGGWTQWSNCSADCGIGLKQRTRNCDNPKPEYG GKDCTGITSEINTCKAADCTTYTDGRKLQCTVLDSLPIRRRSHTWLPYQAKNRKDYCVLTCISNRTKEIATFDDIPVDNG TPCSYDEPNNICVDGECIQVGCDGVRNSTVREDRCGVCDGDDSTCKEVSGMFKKKLPYTGRGREYAEVIVLPKGARHIAI KETATSPHFLVPNDDYTYEQMLYEYRYDGWTECSVSCGIGSQQLIYYCYDKATGEKVDNDTKCLFLEKPETNPVKCERIN CNAETFQWALLVSWSDCSSACGNDGYQYQEYRCERDVGNGNYEAVSFDLCNFVPAPNYTRPCNRIPCSDVKWIPTDEWSA CSESCGTNGLKTKIYECVDSQSNHLSEENCKDLFKPEATEKCNRKACIKEWYRLESTNQWGECSASCGWEGLAIRVYECK KINSNDEVEVVDVENCESYEGDKEMRPCNRKACSNGYYDWIQLSDWSECSSLCGETGIQYQEYGCFEISSAQDVHPMNAS FCEGPDHSNVTRPCNRVPCYTFQWIPTSWGECTSICGDDGIQHRIYTCEKEYVNGSLEAVGDNFCNGIKHPNDSQECNRR PCFSYTWVMSPNWTECTATCGDDGVQFQKYSCFIHYVNDSMISASDNEDCKNLDTPLISRDCNRIDCAHINGVKRLTGVL VLLRAEMTVYKLKLNVPFPVEWVSSPVRFTAVIPLELLVTHYAPDPHL |
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