Gene
| Gene Model ID | pfu_aug2.0_130.1_00292 |
|---|---|
| Locus | scaffold130.1 : 232264 ... 253012 : - |
| To GenomeBrowser | scaffold130.1:232264..253012 |
| Genes list of scaffold | scaffold130.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_130.1_00292.t1 | 1 | 1 | CLN3 | 7 | 277 | 2.7e-22 | 79.1 | 1.0e-24 | 1.5e-20 | 73.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_130.1_00292.t1 | gi|524901169|ref|XP_005106996.1| | PREDICTED: battenin-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_130.1_00292.t1 | gi|524901171|ref|XP_005106997.1| | PREDICTED: battenin-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_130.1_00292.t1 | gi|260813794|ref|XP_002601601.1| | hypothetical protein BRAFLDRAFT_85830 [Branchiostoma floridae] | 2.0e-37 |
| pfu_aug2.0_130.1_00292.t1 | gi|754351839|ref|XP_011270729.1| | hypothetical protein CAOG_09041 [Capsaspora owczarzaki ATCC 30864] | 6.0e-36 |
| pfu_aug2.0_130.1_00292.t1 | gi|470252508|ref|XP_004359351.1| | Batten's disease protein Cln3 family protein [Dictyostelium fasciculatum] | 2.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_130.1_00292.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_130.1_00292.t1 atgattaaatgttgtaagataggcctcttcattctgggatctattaataatcttccctatgttattgtaacatcagctgc ttctactatagctgacagttttaacaagcgcaatgatgttggtgtggtgttcggggccaatgtagctttgtctgtgatag ttaaagggctgaatgggttcttcctcctaggtgtaccatataaatacaggtactttgccaatgcctgtataatggtcata gggctgaatgggttcttcctcctgggtgtaccatataaatataggtactttgccaatgcctgtataatggtcataggttt gattggtgtggcttttgctaataatttttggctagctatcactttcattgttataatgggtgcatctgcagcatttggtg aaaatgttgcccttggatatttacgtctgtttgacagtaagctggtcaatgcttggtcaagtggtactgggatggcagga gtgctcggctcaggaatctacattatattcggttgtacaattggagagggaaataaaacagcacaattaaagcacctcac taaatatgctttcctgctaaccttgccgtttgttttactatatttggtggcatacatattcatcataaagagtccgaatg acagtgacacagctccacccactatacaggatgacgaggaaccactcatagaggaatcaaatgagtcagaaaaaagtgta tctgacccagttacagaaacttcattccaaaggataggcaggtgcttcaaactcataggatggctgtcattcaatttatg tacagtatatgtttttgagtacgtggctcagggttgtgcagccaaagtccgacctaagtcagaatataacaaaggatgtc ctgagctgtttgctgctttatcactctgttaccagagattacgcggctcaaaatttcctatagggtcgatttag |
|
Protein
| Protein ID | pfu_aug2.0_130.1_00292.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_130.1_00292.t1 MIKCCKIGLFILGSINNLPYVIVTSAASTIADSFNKRNDVGVVFGANVALSVIVKGLNGFFLLGVPYKYRYFANACIMVI GLNGFFLLGVPYKYRYFANACIMVIGLIGVAFANNFWLAITFIVIMGASAAFGENVALGYLRLFDSKLVNAWSSGTGMAG VLGSGIYIIFGCTIGEGNKTAQLKHLTKYAFLLTLPFVLLYLVAYIFIIKSPNDSDTAPPTIQDDEEPLIEESNESEKSV SDPVTETSFQRIGRCFKLIGWLSFNLCTVYVFEYVAQGCAAKVRPKSEYNKGCPELFAALSLCYQRLRGSKFPIGSI |
|