Gene
| Gene Model ID | pfu_aug2.0_130.1_00295 |
|---|---|
| Locus | scaffold130.1 : 332023 ... 337593 : + |
| To GenomeBrowser | scaffold130.1:332023..337593 |
| Genes list of scaffold | scaffold130.1 |
| Synonym | pfu_aug1.0_6939.1_45539 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cre-tag-97 protein | GO:0003700 GO:0005634 GO:0006355 GO:0043565 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_130.1_00295.t1 | 2 | 1 | SAM_PNT | 47 | 122 | 5.6e-14 | 51.6 | 8.2e-17 | 4.0e-13 | 48.9 |
| pfu_aug2.0_130.1_00295.t1 | 2 | 2 | SAM_PNT | 288 | 303 | 5.6e-14 | 51.6 | 0.1 | 510.0 | 0.5 |
| pfu_aug2.0_130.1_00295.t1 | 1 | 1 | Ets | 292 | 377 | 5.3e-21 | 74.5 | 2.3e-24 | 1.1e-20 | 73.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_130.1_00295.t1 | gi|260826550|ref|XP_002608228.1| | hypothetical protein BRAFLDRAFT_87894 [Branchiostoma floridae] | 4.99997e-41 |
| pfu_aug2.0_130.1_00295.t1 | gi|676466047|ref|XP_009057441.1| | hypothetical protein LOTGIDRAFT_121767, partial [Lottia gigantea] | 5.0e-39 |
| pfu_aug2.0_130.1_00295.t1 | gi|268581889|ref|XP_002645928.1| | C. briggsae CBR-TAG-97 protein [Caenorhabditis briggsae] | 2.0e-35 |
| pfu_aug2.0_130.1_00295.t1 | gi|392928078|ref|NP_001257262.1| | TAG-97, isoform b [Caenorhabditis elegans] | 7.0e-35 |
| pfu_aug2.0_130.1_00295.t1 | gi|392928076|ref|NP_001257261.1| | TAG-97, isoform a [Caenorhabditis elegans] | 2.0e-34 |
Transcript
| Transcript ID | pfu_aug2.0_130.1_00295.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_130.1_00295.t1 atggcatcagtctgcgtaccacaatcgattccagaaacattgtcaaacgatataagcgattccgaaatgagtttttaccc cgaaggagacatgaaaccctgcatgcaagaaatcctgagtcccgtacagaccgacatgctcagctggacacagcaacatc cattcaactggaacaccatccaggtattggattggatctactatgttgctgaggctttgggtatggacgtggccgaactg agaggagagagcttccagaatattaacggacaacaactgtgtagaatgagcaaggaagacttctgtaacaaagaccagaa atatggatcacagttccacgaaaacttgaccaaacttatcacagattctacatttattgaaccatcaccagtcgattata gcgctgattgtggtggtcagtttgccgagctggtcagcgctctcacaaacaatgatgaagaaatccacaaaatgcttgat aagaatattgagattttggaaagaaaagtcaatcctaccaatggctgtcagtcatacaacatcctaggagcatggtatga tatcgatgacagtatggacttcccaatggatccatcagctgattctggatatattagtggagattcctgtgacggtcaca gtatccctgactgcataaccgattcccctgtgttctccgaggcagaggaggcagcattccccgttaccgtggagtcccca aatcccgaggctccaaatcccgtcaaaaagaagagcaggaaacgtaactcttccagtatctcaactgatagcggtgttgg tgacggagaggagggaagtgagagaaagaaaggcaaccgcggcagaaaagttggtcaatcctcaaaaggaaaccatcttt gggaattcattagagatctacttaaaaattcaaacttcaatcccactctcctgcgctgggaggataaagaagctggagtg ttcagatttgtccaatcagaggccgtggctcaaatgtggggtcgtcaaaagaacaacacgaccatgacctacgagaaact cagccgagcaatgaggttttgccggacagctggctattttgcagatgttcccaaaaacggcaaattcccaaagaagctct gctttaaatttggaccaaaggcttttggttggcgcgacatgtag |
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Protein
| Protein ID | pfu_aug2.0_130.1_00295.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_130.1_00295.t1 MASVCVPQSIPETLSNDISDSEMSFYPEGDMKPCMQEILSPVQTDMLSWTQQHPFNWNTIQVLDWIYYVAEALGMDVAEL RGESFQNINGQQLCRMSKEDFCNKDQKYGSQFHENLTKLITDSTFIEPSPVDYSADCGGQFAELVSALTNNDEEIHKMLD KNIEILERKVNPTNGCQSYNILGAWYDIDDSMDFPMDPSADSGYISGDSCDGHSIPDCITDSPVFSEAEEAAFPVTVESP NPEAPNPVKKKSRKRNSSSISTDSGVGDGEEGSERKKGNRGRKVGQSSKGNHLWEFIRDLLKNSNFNPTLLRWEDKEAGV FRFVQSEAVAQMWGRQKNNTTMTYEKLSRAMRFCRTAGYFADVPKNGKFPKKLCFKFGPKAFGWRDM |
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