Gene
| Gene Model ID | pfu_aug2.0_130.1_00298 |
|---|---|
| Locus | scaffold130.1 : 451009 ... 461519 : + |
| To GenomeBrowser | scaffold130.1:451009..461519 |
| Genes list of scaffold | scaffold130.1 |
| Synonym | pfu_aug1.0_4983.1_67117 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_130.1_00298.t1 | 1 | 1 | Lectin_C | 50 | 160 | 3.0e-17 | 63.1 | 5.3e-21 | 4.0e-17 | 62.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_130.1_00298.t1 | gi|156407854|ref|XP_001641572.1| | predicted protein [Nematostella vectensis] | 2.0e-20 |
| pfu_aug2.0_130.1_00298.t1 | gi|156407860|ref|XP_001641575.1| | predicted protein [Nematostella vectensis] | 2.0e-19 |
| pfu_aug2.0_130.1_00298.t1 | gi|348540744|ref|XP_003457847.1| | PREDICTED: type-2 ice-structuring protein-like [Oreochromis niloticus] | 7.0e-19 |
| pfu_aug2.0_130.1_00298.t1 | gi|617512450|ref|XP_007542920.1| | PREDICTED: galactose-specific lectin nattectin-like isoform X2 [Poecilia formosa] | 8.0e-19 |
| pfu_aug2.0_130.1_00298.t1 | gi|617512447|ref|XP_007542919.1| | PREDICTED: galactose-specific lectin nattectin-like isoform X1 [Poecilia formosa] | 2.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_130.1_00298.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_130.1_00298.t1 atgattgtttctgctatgctcgggatattcatctcatatgctattggttgttgccgtggtaaagaaaatgacagtttctt cccagaaggctgtgatgatggctggatacccttccggggtcactgctatctcttttcagatgatagactctcgtggtatg ctgcaaaggtcaaatgcaaccagaaaaaagggtatcttgccagagttgaatcacagatagagagtatgtggcttaaagcc caagctagaatactgacgagagagtacacgtggctagggggtactgatgcaggccatgagggtatatggatgtgggagtc aaatatgaaaaaagtggagtataccgattttctcaaaggtcagccagataatggcggcggcaacgaaaactgcctggaaa tgtactcaactggaaagacaggtgcctatacgtggaatgatttaaattgtgatgtccaaagaaagttcgtatgtgaaaag ggcgtaaagaaaaatccttgtgaattcattgggcggaaaagcttcgccagaggtcgacctctaaccatcatcaacagtta taaggagaaatga |
|
Protein
| Protein ID | pfu_aug2.0_130.1_00298.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_130.1_00298.t1 MIVSAMLGIFISYAIGCCRGKENDSFFPEGCDDGWIPFRGHCYLFSDDRLSWYAAKVKCNQKKGYLARVESQIESMWLKA QARILTREYTWLGGTDAGHEGIWMWESNMKKVEYTDFLKGQPDNGGGNENCLEMYSTGKTGAYTWNDLNCDVQRKFVCEK GVKKNPCEFIGRKSFARGRPLTIINSYKEK |
|