Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1302.1_08302
Locus scaffold1302.1 : 31206 ... 55927 : +
To GenomeBrowser scaffold1302.1:31206..55927
Genes list of scaffold scaffold1302.1
Synonym pfu_aug1.0_2275.1_37260

Manual annotation
Transcript
Transcript IDpfu_aug2.0_1302.1_08302.t1
Definition-
>pfu_aug2.0_1302.1_08302.t1
atgtccgacagttaccgctgtcatgactgtcatatgtcctttgggaccatacagttactacagaaacataaacagaagtt
ctgtgtgggagggtcggtgggggacccagacagtctcttactcaggaggggactacgatcagcagacgaacccgtgggta
gatcagtatcgccggacgataggcctttaactgatactaaagtggttaacaggaaggttaaacaactgttggctcacaag
aaaaggcaagaaaagttacgagatataaggaatttagaagagaggattttattggacgccttggaagattccgaacatcg
cctccatggttccagtcctacacgccgcagcaagagtcgtcttcccctttcaaaagacaaggaagtccagaatttacaat
tagagtatgagaaagtcagaaatctggagaagatgcacccgtcagatttgcttctccttgcccctgatatccccctggct
ccacccctggggagggactcaagaattgggaatttctccgtcatgtccaacaccagtatgagcatccacttacctgatga
tgattaccagcgttacaaccctaatcaggacgcacagctacgacagctagcggagaaccatggtagacaaatggaatatt
tacagctcaggaaccgagacctggagaaacagaaagaagatattagacgaagattagcagagctgggatcaaaaggtcgg
ccctctggaggagacgatcaggcagcattactagcggagcttagagctcaggaggagagaaaccaaagagctctggaaga
gctcagacggcagttatatgacatcaatcataaacgggtcaatgttattgaggttgagaagccctcccagcagccccaca
ttgtggtacaaccctcccagcctcctcctgccccacccccacaacctgacaccggcaggaagtcctacatttatcctgtg
tactatggcagctcactggtggcagaaatcagtgccatacgacaagcgtacttacagaatgggggtaatgacccggatgt
actagctcagatgtcacagatgcaggcggaggcacaggccatcgaggatcagatgaagagagatggctacgataatagac
atcgagataagaaagacaaagaccagttccgacatttagagatggagaacgagcgccttcacagagaattgttactttta
caagagcagaactttcaagcgcgggagagaaaaaagtcagacagagaagaggagctggagaggcagttaagacgtttaca
agaggaacaactcaggaaaatgctggagcttcaaggggagataaactcgctgaaaaaccgctcaatgattgaggtgtaca
gacagccacctcctcccccaccaccgcaaaaagctgagatgcctgcgttattacagagaccttacgtagaggtggaaccc
atggctccctacgatcaatacccaaaccgatttaacaaacagcgccttcctacagcgtatcattcctgggtcaccacaca
aagccacaaaccttatgatatatacagaaaaaatccctttgatgagccccaggtggaatatacagatgacggtacccccg
tggctcccccctcccaagattataggataacaaggatggctgaagctcgcgcaatagataatgctgaatcaaacacacaa
gagacccagaatcctgagaatcagactcaggttcaagtcggggcctcctag
Transcript IDpfu_aug2.0_1302.1_08302.t2
Definition-
>pfu_aug2.0_1302.1_08302.t2
atgtccgacagttaccgctgtcatgactgtcatatgtcctttgggaccatacagttactacagaaacataaacagaagtt
ctgtgtgggagggtcggtgggggacccagacagtctcttactcaggaggggactacgatcagcagacgaacccgtgggta
gatcagtatcgccggacgataggcctttaactgatactaaagtggttaacaggaaggttaaacaactgttggctcacaag
aaaaggcaagaaaagttacgagatataaggaatttagaagagaggattttattggacgccttggaagattccgaacatcg
cctccatggttccagtcctacacgccgcagcaagagtcgtcttcccctttcaaaagacaaggaagtccagaatttacaat
tagagtatgagaaagtcagaaatctggagaagatgcacccgtcagatttgcttctccttgcccctgatatccccctggct
ccacccctggggagggactcaagaattgggaatttctccgtcatgtccaacaccagtatgagcatccacttacctgatga
tgattaccagcgttacaaccctaatcaggacgcacagctacgacagctagcggagaaccatggtagacaaatggaatatt
tacagctcaggaaccgagacctggagaaacagaaagaagatattagacgaagattagcagagctgggatcaaaaggtcgg
ccctctggaggagacgatcaggcagcattactagcggagcttagagctcaggaggagagaaaccaaagagctctggaaga
gctcagacggcagttatatgacatcaatcataaacgggtcaatgttattgaggttgagaagccctcccagcagccccaca
ttgtggtacaaccctcccagcctcctcctgccccacccccacaacctgacaccggcaggaagtcctacatttatcctgtg
tactatggcagctcactggtggcagaaatcagtgccatacgacaagcgtacttacagaatgggggtaatgacccggatgt
actagctcagatgtcacagatgcaggcggaggcacaggccatcgaggatcagatgaagagagatggctacgataatagac
atcgagataagaaagacaaagaccagttccgacatttagagatggagaacgagcgccttcacagagaattgttactttta
caagagcagaactttcaagcgcgggagagaaaaaagtcagacagagaagaggagctggagaggcagttaagacgtttaca
agaggaacaactcaggaaaatgctggagcttcaaggggagataaactcgctgaaaaaccgctcaatgattgaggtgtaca
gacagccacctcctcccccaccaccgcaaaaagctgagatgcctgcgttattacagagaccttacgtagaggtggaaccc
atggctccctacgatcaatagacatacacagtacgcgttcctggcacaagtagggtacctgtgcccatgtctatgcgcag
tgtgtggtga
Transcript IDpfu_aug2.0_1302.1_08302.t3
Definition-
>pfu_aug2.0_1302.1_08302.t3
atgtccgacagttaccgctgtcatgactgtcatatgtcctttgggaccatacagttactacagaaacataaacagaagtt
ctgtgtgggagggtcggtgggggacccagacagtctcttactcaggaggggactacgatcagcagacgaacccgtgggta
gatcagtatcgccggacgataggcctttaactgatactaaagtggttaacaggaaggttaaacaactgttggctcacaag
aaaaggcaagaaaagttacgagatataaggaatttagaagagaggattttattggacgccttggaagattccgaacatcg
cctccatggttccagtcctacacgccgcagcaagagtcgtcttcccctttcaaaagacaaggaagtccagaatttacaat
tagagtatgagaaagtcagaaatctggagaagatgcacccgtcagatttgcttctccttgcccctgatatccccctggct
ccacccctggggagggactcaagaattgggaatttctccgtcatgtccaacaccagtatgagcatccacttacctgatga
tgattaccagcgttacaaccctaatcaggacgcacagctacgacagctagcggagaaccatggtagacaaatggaatatt
tacagctcaggaaccgagacctggagaaacagaaagaagatattagacgaagattagcagagctgggatcaaaaggtcgg
ccctctggaggagacgatcaggcagcattactagcggagcttagagctcaggaggagagaaaccaaagagctctggaaga
gctcagacggcagttatatgacatcaatcataaacgggtcaatgttattgaggttgagaagccctcccagcagccccaca
ttgtggtacaaccctcccagcctcctcctgccccacccccacaacctgacaccggcaggaagtcctacatttatcctgtg
tactatggcagctcactggtggcagaaatcagtgccatacgacaagcgtacttacagaatgggggtaatgacccggatgt
actagctcagatgtcacagatgcaggcggaggcacaggccatcgaggatcagatgaagagagatggctacgataatagac
atcgagataagaaagacaaagaccagttccgacatttagagatggagaacgagcgccttcacagagaattgttactttta
caagagcagaactttcaagcgcgggagagaaaaaagtcagacagagaagaggagctggagaggcagttaagacgtttaca
agaggaacaactcaggaaaatgctggagcttcaaggggagataaactcgctgaaaaaccgctcaatgattgaggtgtaca
gacagccacctcctcccccaccaccgcaaaaagctgagatgcctgcgttattacagagaccttacgtagaggtggaaccc
atggctccctacgatcaatacccaaatcgctatcatactggtactatagaaaccaaccatcatacgtgggtggcaaccca
acactacaaacatgataatcgtcttgccccgcccactgccaaaccggaacgattcggtccagatattgacgatgttgact
ga

Protein
Protein IDpfu_aug2.0_1302.1_08302.t1
Definition-
>pfu_aug2.0_1302.1_08302.t1
MSDSYRCHDCHMSFGTIQLLQKHKQKFCVGGSVGDPDSLLLRRGLRSADEPVGRSVSPDDRPLTDTKVVNRKVKQLLAHK
KRQEKLRDIRNLEERILLDALEDSEHRLHGSSPTRRSKSRLPLSKDKEVQNLQLEYEKVRNLEKMHPSDLLLLAPDIPLA
PPLGRDSRIGNFSVMSNTSMSIHLPDDDYQRYNPNQDAQLRQLAENHGRQMEYLQLRNRDLEKQKEDIRRRLAELGSKGR
PSGGDDQAALLAELRAQEERNQRALEELRRQLYDINHKRVNVIEVEKPSQQPHIVVQPSQPPPAPPPQPDTGRKSYIYPV
YYGSSLVAEISAIRQAYLQNGGNDPDVLAQMSQMQAEAQAIEDQMKRDGYDNRHRDKKDKDQFRHLEMENERLHRELLLL
QEQNFQARERKKSDREEELERQLRRLQEEQLRKMLELQGEINSLKNRSMIEVYRQPPPPPPPQKAEMPALLQRPYVEVEP
MAPYDQYPNRFNKQRLPTAYHSWVTTQSHKPYDIYRKNPFDEPQVEYTDDGTPVAPPSQDYRITRMAEARAIDNAESNTQ
ETQNPENQTQVQVGAS
Protein IDpfu_aug2.0_1302.1_08302.t2
Definition-
>pfu_aug2.0_1302.1_08302.t2
MSDSYRCHDCHMSFGTIQLLQKHKQKFCVGGSVGDPDSLLLRRGLRSADEPVGRSVSPDDRPLTDTKVVNRKVKQLLAHK
KRQEKLRDIRNLEERILLDALEDSEHRLHGSSPTRRSKSRLPLSKDKEVQNLQLEYEKVRNLEKMHPSDLLLLAPDIPLA
PPLGRDSRIGNFSVMSNTSMSIHLPDDDYQRYNPNQDAQLRQLAENHGRQMEYLQLRNRDLEKQKEDIRRRLAELGSKGR
PSGGDDQAALLAELRAQEERNQRALEELRRQLYDINHKRVNVIEVEKPSQQPHIVVQPSQPPPAPPPQPDTGRKSYIYPV
YYGSSLVAEISAIRQAYLQNGGNDPDVLAQMSQMQAEAQAIEDQMKRDGYDNRHRDKKDKDQFRHLEMENERLHRELLLL
QEQNFQARERKKSDREEELERQLRRLQEEQLRKMLELQGEINSLKNRSMIEVYRQPPPPPPPQKAEMPALLQRPYVEVEP
MAPYDQXTYTVRVPGTSRVPVPMSMRSVW
Protein IDpfu_aug2.0_1302.1_08302.t3
Definition-
>pfu_aug2.0_1302.1_08302.t3
MSDSYRCHDCHMSFGTIQLLQKHKQKFCVGGSVGDPDSLLLRRGLRSADEPVGRSVSPDDRPLTDTKVVNRKVKQLLAHK
KRQEKLRDIRNLEERILLDALEDSEHRLHGSSPTRRSKSRLPLSKDKEVQNLQLEYEKVRNLEKMHPSDLLLLAPDIPLA
PPLGRDSRIGNFSVMSNTSMSIHLPDDDYQRYNPNQDAQLRQLAENHGRQMEYLQLRNRDLEKQKEDIRRRLAELGSKGR
PSGGDDQAALLAELRAQEERNQRALEELRRQLYDINHKRVNVIEVEKPSQQPHIVVQPSQPPPAPPPQPDTGRKSYIYPV
YYGSSLVAEISAIRQAYLQNGGNDPDVLAQMSQMQAEAQAIEDQMKRDGYDNRHRDKKDKDQFRHLEMENERLHRELLLL
QEQNFQARERKKSDREEELERQLRRLQEEQLRKMLELQGEINSLKNRSMIEVYRQPPPPPPPQKAEMPALLQRPYVEVEP
MAPYDQYPNRYHTGTIETNHHTWVATQHYKHDNRLAPPTAKPERFGPDIDDVD

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495