Gene
| Gene Model ID | pfu_aug2.0_1302.1_08306 |
|---|---|
| Locus | scaffold1302.1 : 102026 ... 114874 : + |
| To GenomeBrowser | scaffold1302.1:102026..114874 |
| Genes list of scaffold | scaffold1302.1 |
| Synonym | pfu_aug1.0_317.1_14968 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tata box-binding protein 1 | GO:0003677 GO:0006352 GO:0032440 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1302.1_08306.t1 | 2 | 1 | TBP | 65 | 147 | 1.4013e-45 | 152.2 | 1.4e-24 | 6.8e-21 | 73.4 |
| pfu_aug2.0_1302.1_08306.t1 | 2 | 2 | TBP | 153 | 236 | 1.4013e-45 | 152.2 | 1.2e-25 | 6.1e-22 | 76.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1302.1_08306.t1 | gi|242015292|ref|XP_002428298.1| | trf2 protein, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_1302.1_08306.t1 | gi|751211018|ref|XP_011158232.1| | PREDICTED: TATA box-binding protein-like protein 1 [Solenopsis invicta] | 0.0 |
| pfu_aug2.0_1302.1_08306.t1 | gi|270007920|gb|EFA04368.1| | hypothetical protein TcasGA2_TC014666 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_1302.1_08306.t1 | gi|749799999|ref|XP_011153571.1| | PREDICTED: TATA box-binding protein-like protein 1 [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_1302.1_08306.t1 | gi|759052550|ref|XP_011335411.1| | PREDICTED: TATA box-binding protein-like protein 1 [Cerapachys biroi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1302.1_08306.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1302.1_08306.t1 atggctgaggttgagtcggcggcaaactttctgtccagtactgagaattcttttcctgatcaccaagatcaaaatgaaat ccaaaattgcattcagcaatcatcctatggggaacctgcaggatttgatgatatgaatgatgctcaagaaaacggtgaaa gcaatacgtgtgacagtgatgaaccaaccattgacattatcattaacaacgttgtttgtagttttagcactcgatgccat ctcaacttaaaacaaattgcaatggaaggaatgaatgtggaatatcgcagagaaaactcaatgtgtaatatgaagataag acggccatacacaactgccagtatttggtcctcaggaaaaattacatgtactggtgcaacaagtgaggatttggcaaaag ttgcagccagaagatttgctagaatattacagcgtcttggatttaaagtcaggttcagtaattatagagttgtgaatgta ttagggacatgttcattgccgttcaggatacggatcaacgaattctccaagaagtaccctcgagaggccagctatgagcc tgagcttcatccaggagtgacttacaaaataccatctccaaaagctacgctgaaaatcttctctacgggaagtattacag tgacagctcctagagtagctaatatacagtcagctatagaacacatctttccnttggtgctagaattccgatctgagaaa aatgacattgacaaagacatcttgtcgaaagaaatgagattcatacaaaaacaacgaaaggcaataaaaccaaagaggcc gatactcgactaccaggaaatagacctagaggactacgactcagattggagtgaagaagaattcgacagtgatactagtc aagattga |
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Protein
| Protein ID | pfu_aug2.0_1302.1_08306.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1302.1_08306.t1 MAEVESAANFLSSTENSFPDHQDQNEIQNCIQQSSYGEPAGFDDMNDAQENGESNTCDSDEPTIDIIINNVVCSFSTRCH LNLKQIAMEGMNVEYRRENSMCNMKIRRPYTTASIWSSGKITCTGATSEDLAKVAARRFARILQRLGFKVRFSNYRVVNV LGTCSLPFRIRINEFSKKYPREASYEPELHPGVTYKIPSPKATLKIFSTGSITVTAPRVANIQSAIEHIFXLVLEFRSEK NDIDKDILSKEMRFIQKQRKAIKPKRPILDYQEIDLEDYDSDWSEEEFDSDTSQD |
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