Gene
| Gene Model ID | pfu_aug2.0_1302.1_08307 |
|---|---|
| Locus | scaffold1302.1 : 121439 ... 127995 : - |
| To GenomeBrowser | scaffold1302.1:121439..127995 |
| Genes list of scaffold | scaffold1302.1 |
| Synonym | pfu_aug1.0_317.1_14969 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ccnf_xentr ame: full=cyclin-f | GO:0007049 GO:0043229 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1302.1_08307.t1 | 1 | 1 | Cyclin_C | 270 | 346 | 5.1e-09 | 36.0 | 3.0e-12 | 1.1e-08 | 34.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1302.1_08307.t1 | gi|676490678|ref|XP_009065348.1| | hypothetical protein LOTGIDRAFT_108005 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1302.1_08307.t1 | gi|507974823|ref|XP_004691873.1| | 0.0 | |
| pfu_aug2.0_1302.1_08307.t1 | gi|585707535|ref|XP_006824002.1| | PREDICTED: cyclin-F-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1302.1_08307.t1 | gi|260800992|ref|XP_002595380.1| | hypothetical protein BRAFLDRAFT_119004 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1302.1_08307.t1 | gi|58331887|ref|NP_001011083.1| | cyclin-F [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1302.1_08307.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1302.1_08307.t1 atggtatttatctcattttttttgaatgcattgagcaagttccagaaatcacccaacacatttatcccagtacacatgca cctaagaccgaggacgcggagtcagctgacaatatggggtttaccggaggaagttatcctcttcatcctgcgaggactac acataaaggacatactcaacatgcgtgcagttcatccattctttcgtgatttgattgacggcagtccaggagtatggagc ttggcaagcttcaaagacacatggccgtccgccaacaacattgcgcattacgacaaagccggggaatttggaaatttgga agcattgataaaaatggccatagctttcctctataatgaaggattaccaaatgactttgatggtaagaatgtgaccagta atggagtgaaggcagcagagatgttttgtcgcatagaatcaatgacagtcgctacagatcccttcacctggcttttcata cgtcctccatggtcaaactctggggcttgctgtaaagaatgtgtgtttacatacatgaaaaactatctgaatgagaatga agagaaagaggcagactgtaggaatatttgtgtgtgtgttgctaaaacattgaatgtccttgatgaggatgacagccaag gagaggcggtgctttatttgtcaaaagcagccaatcacaaatcaggaatagctgcttttatgatgtggcaaaagaaatac cagtcatgtgtacatccttgtggattggcttgtggaggtagcggccatggttctctgttcaagatatctaggaaaggaca taatcncgcagccagctgtgttcttttagccaaattacttatgaaactagagaatccctggtcacatcagatggtacagt ttactggctacactatagaagacatcagtagatgtgcattccatatgcatgagaagtgcttcttagaaggatctgtagtt gatcacagagacgtcacgctccaggcagtgaagctacggtactcggaggaaaagctatacaaagtcagtgagatgtctat aatgagctatgaagaattatgtgctatgttaggagtgacagaacacatactacagggtacagatgtacgtgtcaagttta aaaattcggatgaactcattctctcaccttcacgcaagaagaggagatgcattgaaaggaacatgccggatctccaagaa agagaaagtgctgctacacctacgatggaagattccatgattctgaatgaatctgtcatgtctggttactatggcgatag agaggatgaagatgagtcgttttatgagtttgatgagtcgagtgaagcaagtggccattcagagatggagcagatgggat cagagagtgatacatactttgccagtatttcaagaatttgtaacatttcccccatcaaaccaaagtctacaataaactgt gatacagaatgttcatcttccggtgtatccctgtctccgtcgtcggccatgatgtctgacagcccccgtccatcatccag ctcaggtcatcctatcttaccaaactcacctcttggaatatcaggtcattcatcacacatctggcgtaggtcgtcagcaa ggaaaagcaagattgtcagtgactcagattgtgactctcctagaagtgctgaaaagcaaggttctactagctatatgaca ttacgacgcacaaccaagaggaaaagtagacgggcactgtgtaccagcactactcaatcgtga |
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Protein
| Protein ID | pfu_aug2.0_1302.1_08307.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1302.1_08307.t1 MVFISFFLNALSKFQKSPNTFIPVHMHLRPRTRSQLTIWGLPEEVILFILRGLHIKDILNMRAVHPFFRDLIDGSPGVWS LASFKDTWPSANNIAHYDKAGEFGNLEALIKMAIAFLYNEGLPNDFDGKNVTSNGVKAAEMFCRIESMTVATDPFTWLFI RPPWSNSGACCKECVFTYMKNYLNENEEKEADCRNICVCVAKTLNVLDEDDSQGEAVLYLSKAANHKSGIAAFMMWQKKY QSCVHPCGLACGGSGHGSLFKISRKGHNXAASCVLLAKLLMKLENPWSHQMVQFTGYTIEDISRCAFHMHEKCFLEGSVV DHRDVTLQAVKLRYSEEKLYKVSEMSIMSYEELCAMLGVTEHILQGTDVRVKFKNSDELILSPSRKKRRCIERNMPDLQE RESAATPTMEDSMILNESVMSGYYGDREDEDESFYEFDESSEASGHSEMEQMGSESDTYFASISRICNISPIKPKSTINC DTECSSSGVSLSPSSAMMSDSPRPSSSSGHPILPNSPLGISGHSSHIWRRSSARKSKIVSDSDCDSPRSAEKQGSTSYMT LRRTTKRKSRRALCTSTTQS |
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