Gene
| Gene Model ID | pfu_aug2.0_1302.1_08309 |
|---|---|
| Locus | scaffold1302.1 : 136751 ... 149165 : - |
| To GenomeBrowser | scaffold1302.1:136751..149165 |
| Genes list of scaffold | scaffold1302.1 |
| Synonym | pfu_aug1.0_317.1_14971 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| coiled-coil domain-containing protein 40 | GO:0003143 GO:0003341 GO:0061371 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1302.1_08309.t1 | 11 | 1 | BRE1 | 154 | 186 | 3.1e-11 | 43.0 | 0.088 | 260.0 | 1.6 |
| pfu_aug2.0_1302.1_08309.t1 | 11 | 2 | BRE1 | 182 | 252 | 3.1e-11 | 43.0 | 0.36 | 1100.0 | -0.4 |
| pfu_aug2.0_1302.1_08309.t1 | 11 | 3 | BRE1 | 247 | 309 | 3.1e-11 | 43.0 | 0.59 | 1700.0 | -1.0 |
| pfu_aug2.0_1302.1_08309.t1 | 11 | 4 | BRE1 | 333 | 409 | 3.1e-11 | 43.0 | 0.22 | 660.0 | 0.3 |
| pfu_aug2.0_1302.1_08309.t1 | 11 | 5 | BRE1 | 426 | 494 | 3.1e-11 | 43.0 | 0.96 | 2800.0 | -1.7 |
| pfu_aug2.0_1302.1_08309.t1 | 11 | 6 | BRE1 | 500 | 563 | 3.1e-11 | 43.0 | 0.39 | 1200.0 | -0.5 |
| pfu_aug2.0_1302.1_08309.t1 | 11 | 7 | BRE1 | 569 | 595 | 3.1e-11 | 43.0 | 0.37 | 1100.0 | -0.4 |
| pfu_aug2.0_1302.1_08309.t1 | 11 | 8 | BRE1 | 600 | 697 | 3.1e-11 | 43.0 | 1.1e-14 | 3.1e-11 | 43.0 |
| pfu_aug2.0_1302.1_08309.t1 | 11 | 9 | BRE1 | 752 | 783 | 3.1e-11 | 43.0 | 0.097 | 290.0 | 1.5 |
| pfu_aug2.0_1302.1_08309.t1 | 11 | 10 | BRE1 | 835 | 862 | 3.1e-11 | 43.0 | 0.52 | 1500.0 | -0.9 |
| pfu_aug2.0_1302.1_08309.t1 | 11 | 11 | BRE1 | 870 | 918 | 3.1e-11 | 43.0 | 1.3 | 3900.0 | -2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1302.1_08309.t1 | gi|524870373|ref|XP_005091971.1| | PREDICTED: coiled-coil domain-containing protein 40-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1302.1_08309.t1 | gi|291241633|ref|XP_002740716.1| | PREDICTED: coiled-coil domain-containing protein 40-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1302.1_08309.t1 | gi|390344298|ref|XP_795411.3| | 0.0 | |
| pfu_aug2.0_1302.1_08309.t1 | gi|699247793|ref|XP_009860134.1| | PREDICTED: LOW QUALITY PROTEIN: coiled-coil domain-containing protein 40 [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_1302.1_08309.t1 | gi|564263775|ref|XP_006270746.1| | PREDICTED: coiled-coil domain-containing protein 40 [Alligator mississippiensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1302.1_08309.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1302.1_08309.t1 atgcctataagatgttcagagccagttgaggagaaagctccaactcctacaaatgaggtgccaccagatggcggtgaagg tggtgatggcggtgatggtggtgacggtgagccaccacaggaaccaccacagccacctccacaggatataagtaatatcc tgaaccgaccagtgacagaaccagacggtggtgacggcggtggtggcggtgacagtgatgacgaggaggaggaaattgat gatggagaaggggaggagtctgatgctggaagtgaggctgaaacggacatggttgtccttgacccagatcatcctctaat gaaaagattccaaaatgccctcaaagctcatctaacgaaacaagatgagaaggtaactctggaactacgagagttgatag aggcgcttaggaatcgtaaaaaagagcgggaggatctcggtgtagaactgtatggaatccagcaggaactggccagattc cagatgatgttagagaaaaatcatgatgaattcgccaatctgaaccaggctcgtaatcaggaggaacagcagctagatga cgtgaggggattatacaaggatacccaactaaacgtcaacaaggagaaaaagaaatgtgctgaattacaaagtgaagttg aaaatctggcattaagacatttttacatgcaaaatgccaaagaagatgtgaggtctgacattgctataatgaggagagct gcagaaaaagcagacacagaggtgtctaaagctgaaatcgaaaagcagagacaggatttgtttgtggacagactggttga gagagtagacaaactaaaggaggagattgccatgtttgaagctcagatagcagctcaaacagaggagaccaaagctgcca aagaagctctgttagaagctcacatggaaattgaggctattcaactagagaaaaagcagttgttccagcaatggaatagt tcccttattggtatgaggaggagagacgaggcacatgccgccatgcaggaagctcttaatacccaggaacaaaaagtgtt gtccttagaaacagagattgagggatataagaaatctatattcaaggaacaagaacaaaatgagaaactgacattaattt tgaacaagacggaaagggacatagagacagtgaagaaacagctgactcagtgccaagccaagcatgacgcactgaaagca gagtacgctacttataccagaatgttacacgagacagaacaagctcttaacagagctgtcacagataaaaccctacgact gaatgaacttaatgcactgaggaagcagattgagagagaatatttggagaaagtagaacttgaggatgaaataatggaga agatgaggagtcaactgaccatggacaaagctgcccagtacaccaagaaactgaccggcaagaaaagggaactcacaaaa caactggaaacacaaatggcagaggttgaaaatcaaatatcaagagacagtttagaaatatccaatgttcaaacaaggat agaaagacttggaaaaatcttgggtcaacttgatgatgaaattggcggtaaaaatgaagtgatcagtaagagtgaaggag agattgtcaagcgtaatgccattatagagaggaagcagaatattattgatcaatataacaaaaaactggaggttctcatc agtaaggctggtggtgtagagttaggtcccttggagatccagatcaattctctacagaagtctatcgaggctcgtcaaca ggagatagcggagctccagcagatgtggctacgtcagcagagcgagcttgtacagctatctaaagataaggacgctcagt ccagcgacgtacagaaactcaaaaaacaactcactatactgtctcaaaagaaaatcaggactgaaggtgacattgatgag cagaggagggagacgtatgacatagagaggagtatcagaaacatgcaaaatgacatgatcaaactgaacactctactgaa taaggagaaaggaactcacgaatgtcttcaccaggataatattctactggaaaacgactttatcatggcacttaaggagg cagagaaggaatcaattcagatgcaggcaaacctggataacattaaggaagagaaggagcgtctgctgaacagcctggtt gaagctgaacgacagatcatgttatgggagaagaaaacccagttggcccgtgagactcgagctgcagtagattctgaagt aggtcaaggtgaaatcaaggccatgaaggcggagattcatcgtatgcaagtcaggttcacccagctgatgaaacaacagg agaaaatgatacaggaaatggagaaagctgtgtcaaggagagacaccattgtcactagaggtgatgcctcccagaagatc aacaagaaagtgctaactaaaggaacgtttgagagacagatgggagaactgaggaagaaaatcaaagctacaataaatga agcaggttcttgtgatggagagatcctagatctccgttcccatcaaggtgacctgagttctcagttagaacagagacaag tcaatgtacagcagttacagagcacatctgataccatggatggtgacatagagagactttatgaaatcaaacaaaagaat ctaacagagcttctaggaaaacaacagaagtcaaaatattttcaacaagctaaggatggaaaatatgtcatgttatgcaa atctgaatcttcgttagaaaatgaacatacaaaacaggttgaccgtatgcaggcactgagtgccatagtggataggttaa atcaggagttcccacatatacagcctgcgctccgtaaggttacactggctctgagcacgcgcggagatccaagtcaggat tag |
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Protein
| Protein ID | pfu_aug2.0_1302.1_08309.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1302.1_08309.t1 MPIRCSEPVEEKAPTPTNEVPPDGGEGGDGGDGGDGEPPQEPPQPPPQDISNILNRPVTEPDGGDGGGGGDSDDEEEEID DGEGEESDAGSEAETDMVVLDPDHPLMKRFQNALKAHLTKQDEKVTLELRELIEALRNRKKEREDLGVELYGIQQELARF QMMLEKNHDEFANLNQARNQEEQQLDDVRGLYKDTQLNVNKEKKKCAELQSEVENLALRHFYMQNAKEDVRSDIAIMRRA AEKADTEVSKAEIEKQRQDLFVDRLVERVDKLKEEIAMFEAQIAAQTEETKAAKEALLEAHMEIEAIQLEKKQLFQQWNS SLIGMRRRDEAHAAMQEALNTQEQKVLSLETEIEGYKKSIFKEQEQNEKLTLILNKTERDIETVKKQLTQCQAKHDALKA EYATYTRMLHETEQALNRAVTDKTLRLNELNALRKQIEREYLEKVELEDEIMEKMRSQLTMDKAAQYTKKLTGKKRELTK QLETQMAEVENQISRDSLEISNVQTRIERLGKILGQLDDEIGGKNEVISKSEGEIVKRNAIIERKQNIIDQYNKKLEVLI SKAGGVELGPLEIQINSLQKSIEARQQEIAELQQMWLRQQSELVQLSKDKDAQSSDVQKLKKQLTILSQKKIRTEGDIDE QRRETYDIERSIRNMQNDMIKLNTLLNKEKGTHECLHQDNILLENDFIMALKEAEKESIQMQANLDNIKEEKERLLNSLV EAERQIMLWEKKTQLARETRAAVDSEVGQGEIKAMKAEIHRMQVRFTQLMKQQEKMIQEMEKAVSRRDTIVTRGDASQKI NKKVLTKGTFERQMGELRKKIKATINEAGSCDGEILDLRSHQGDLSSQLEQRQVNVQQLQSTSDTMDGDIERLYEIKQKN LTELLGKQQKSKYFQQAKDGKYVMLCKSESSLENEHTKQVDRMQALSAIVDRLNQEFPHIQPALRKVTLALSTRGDPSQD |
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