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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1302.1_08310
Locus scaffold1302.1 : 153446 ... 171318 : +
To GenomeBrowser scaffold1302.1:153446..171318
Genes list of scaffold scaffold1302.1
Synonym pfu_aug1.0_16167.1_68937

Manual annotation
Transcript
Transcript IDpfu_aug2.0_1302.1_08310.t1
Definition-
>pfu_aug2.0_1302.1_08310.t1
atgcatatgaatggggaacttgttctcagaaaggcgaggggattactgtacaggtatagaaggcttcctaagattccttg
cacactgcatggtctgtgttcattgtgtgggccaggcatgtgggacagtggacatgttcccacagtggaatgtgtgggaa
atcacaaggatgatatttgtccctacaatagcaatccaaactctccgatacacaactga
Transcript IDpfu_aug2.0_1302.1_08310.t2
Definition-
>pfu_aug2.0_1302.1_08310.t2
atggattcagtgatggcattcagttccatatttaagaaagccacccatctgttgggtttggggacggacaatctgaagcc
accgcctctggacggggagatcatatactgtaaaaacaatgtgtgtgtacaccctccccgacccctgtctgtcatggacc
ccgagcagcaccaccctggatacctcacgctcagatctcaaagtgacgaggagagtggtccaactctgatcctcacatgg
attccaaattcaactttgaagaaaaatccaaggagtatagaaagcagccctaatcgttcccatgcaaccacgccaagtcc
caggagagctcccagacaggagtttgccaaatctcaggtgcagactccctctccagcaagcagctctcccagaggatcat
gtgtgtcggcagggagtgatgtgggtgaacactattatatggatagagctgtaactcgtaaggggaaaaaactcagtatc
gataattctagtatgaattcagatgactacacagacagttggtctcaacctgaagatgtgaacaggaaactgagttctag
taataaatcacaaactgattcaggaataggtactgaagaggtgcagaataacgaaaaaagtgttcctaacaaagtgtctc
ataaagtcggtacaaatgtcaatatgctacactcaaacaagggaaataatgcagaggggaaagttgtgaataaagaggaa
gagttcagttctcctgatactagtgatggactaacaccagaagaacagctagctgccatgttaaacagaaataaactaca
ttcaaaagcaagggagaggtttgaatccaacaagtcagttagtattgagatgaatggtgacaatttagttgtagtgacag
aggagcttgatcacaatcaaacggcacaaaaagacacttctattgaagatagaaatttgaacaaaaatgaaagtaaattt
gacacaagttctagttcacaatcaactgatgtggaaggtgtgagtttgagttctgactcatctcatccaagtccatctgg
tgctcattataacaaaatgttgacagatttaaaagacaaattggaatatgactctagcacatgtgacagctcagacactc
ttaacacaaattactccaacaattccgtgacaactcctgatatttcagtgactcgatgtcgctattcatcttcatcatca
tcgctaacatctggccctgactcacaaccaccgagtcccgatgtgtcaccacctccatcacctacatttattgacaatac
agagaacctagaatcgccgtctagctgtgactcagcacaagtatctcacaatcttacatttccgtataactcagtgtcat
attctacagcaaagagagacaagaaaagtgccaaagatcaagtttgtggagtcttctctgttgatttaggtcagatgcga
tctattcggctgttctatatggactccctatgtaccacaggccaagttgtcatagccagtagggaaagccagtacaaaat
attacactttcatcatggagggctcgacaaattggcagaaattttcagtgactggaatctatttgcaaagatgaaagaca
agtccaaggaggctgaaggtcagtacaagcagttcctgattgtgcgaccccaggtcacagacgagcagtgtcaccctgag
gagggtatctataacatggtgggggaggaggaatggaagtgtcacatgacctctgatggcaggattggagaggacttcca
actcagaaagcatatattttttggtggattggagcccacgttgcgacatgaatcatggccatttttacttcattattatc
catatgactcctcatttgaggaaagggagcagatcagaaatgacaagtacatcgagtatcaagatatcagaaaaatgagg
gagaacatgggtgaagaggagaaggatcagttttggagaaagattcagtcaatcgttgaaaaagatgtggtacgaacaga
ccgcagtcatccatatttcaaaggggaagataatcctaacattgaagtattacagagcattttgttgaactatgcagtgg
ctaaccctaagatgggttatacccagggaatctcccctaaagattgtgatatggacaaacaattggactatttgaaagag
ttactgcgtctgatgcagcctgacttttatgcacatctgagaaagcttggacaggactccatggaactgcttttctgcca
taggcgaggggattactgtacaggtatagaaggcttcctaagattccttgcacactgcatggtctgtgttcattgtgtgg
gccaggcatgtgggacagtggacatgttcccacagtggaatgtgtgggaaatcacaaggatgatatttgtccctacaata
gcaatccaaactctccgatacacaactgagtag
Transcript IDpfu_aug2.0_1302.1_08310.t3
Definition-
>pfu_aug2.0_1302.1_08310.t3
atggattcagtgatggcattcagttccatatttaagaaagccacccatctgttgggtttggggacggacaatctgaagcc
accgcctctggacggggagatcatatactgtaaaaacaatgtgtgtgtacaccctccccgacccctgtctgtcatggacc
ccgagcagcaccaccctggatacctcacgctcagatctcaaagtgacgaggagagtggtccaactctgatcctcacatgg
attccaaattcaactttgaagaaaaatccaaggagtatagaaagcagccctaatcgttcccatgcaaccacgccaagtcc
caggagagctcccagacaggagtttgccaaatctcaggtgcagactccctctccagcaagcagctctcccagaggatcat
gtgtgtcggcagggagtgatgtgggtgaacactattatatggatagagctgtaactcgtaaggggaaaaaactcagtatc
gataattctagtatgaattcagatgactacacagacagttggtctcaacctgaagatgtgaacaggaaactgagttctag
taataaatcacaaactgattcaggaataggtactgaagaggtgcagaataacgaaaaaagtgttcctaacaaagtgtctc
ataaagtcggtacaaatgtcaatatgctacactcaaacaagggaaataatgcagaggggaaagttgtgaataaagaggaa
gagttcagttctcctgatactagtgatggactaacaccagaagaacagctagctgccatgttaaacagaaataaactaca
ttcaaaagcaagggagaggtttgaatccaacaagtcagttagtattgagatgaatggtgacaatttagttgtagtgacag
aggagcttgatcacaatcaaacggcacaaaaagacacttctattgaagatagaaatttgaacaaaaatgaaagtaaattt
gacacaagttctagttcacaatcaactgatgtggaaggtgtgagtttgagttctgactcatctcatccaagtccatctgg
tgctcattataacaaaatgttgacagatttaaaagacaaattggaatatgactctagcacatgtgacagctcagacactc
ttaacacaaattactccaacaattccgtgacaactcctgatatttcagtgactcgatgtcgctattcatcttcatcatca
tcgctaacatctggccctgactcacaaccaccgagtcccgatgtgtcaccacctccatcacctacatttattgacaatac
agagaacctagaatcgccgtctagctgtgactcagcacaagtatctcacaatcttacatttccgtataactcagtgtcat
attctacagcaaagagagacaagaaaagtgccaaagatcaagtttgtggagtcttctctgttgatttaggtcagatgcga
tctattcggctgttctatatggactccctatgtaccacaggccaagttgtcatagccagtagggaaagccagtacaaaat
attacactttcatcatggagggctcgacaaattggcagaaattttcagtgactggaatctatttgcaaagatgaaagaca
agtgtaactattttacagagtccaaggaggctgaaggtcagtacaagcagttcctgattgtgcgaccccaggtcacagac
gagcagtgtcaccctgaggagggtatctataacatggtgggggaggaggaatggaagtgtcacatgacctctgatggcag
gattggagaggacttccaactcagaaagcatatattttttggtggattggagcccacgttgcgacatgaatcatggccat
ttttacttcattattatccatatgactcctcatttgaggaaagggagcagatcagaaatgacaagtacatcgagtatcaa
gatatcagaaaaatgagggagaacatgggtgaagaggagaaggatcagttttggagaaagattcagtcaatcgttgaaaa
agatgtggtacgaacagaccgcagtcatccatatttcaaaggggaagataatcctaacattgaagtattacatggttgca
tgattcctgctagaatggagcattttgttgaactatgcagtggctaa

Protein
Protein IDpfu_aug2.0_1302.1_08310.t1
Definition-
>pfu_aug2.0_1302.1_08310.t1
MHMNGELVLRKARGLLYRYRRLPKIPCTLHGLCSLCGPGMWDSGHVPTVECVGNHKDDICPYNSNPNSPIHN
Protein IDpfu_aug2.0_1302.1_08310.t2
Definition-
>pfu_aug2.0_1302.1_08310.t2
MDSVMAFSSIFKKATHLLGLGTDNLKPPPLDGEIIYCKNNVCVHPPRPLSVMDPEQHHPGYLTLRSQSDEESGPTLILTW
IPNSTLKKNPRSIESSPNRSHATTPSPRRAPRQEFAKSQVQTPSPASSSPRGSCVSAGSDVGEHYYMDRAVTRKGKKLSI
DNSSMNSDDYTDSWSQPEDVNRKLSSSNKSQTDSGIGTEEVQNNEKSVPNKVSHKVGTNVNMLHSNKGNNAEGKVVNKEE
EFSSPDTSDGLTPEEQLAAMLNRNKLHSKARERFESNKSVSIEMNGDNLVVVTEELDHNQTAQKDTSIEDRNLNKNESKF
DTSSSSQSTDVEGVSLSSDSSHPSPSGAHYNKMLTDLKDKLEYDSSTCDSSDTLNTNYSNNSVTTPDISVTRCRYSSSSS
SLTSGPDSQPPSPDVSPPPSPTFIDNTENLESPSSCDSAQVSHNLTFPYNSVSYSTAKRDKKSAKDQVCGVFSVDLGQMR
SIRLFYMDSLCTTGQVVIASRESQYKILHFHHGGLDKLAEIFSDWNLFAKMKDKSKEAEGQYKQFLIVRPQVTDEQCHPE
EGIYNMVGEEEWKCHMTSDGRIGEDFQLRKHIFFGGLEPTLRHESWPFLLHYYPYDSSFEEREQIRNDKYIEYQDIRKMR
ENMGEEEKDQFWRKIQSIVEKDVVRTDRSHPYFKGEDNPNIEVLQSILLNYAVANPKMGYTQGISPKDCDMDKQLDYLKE
LLRLMQPDFYAHLRKLGQDSMELLFCHRRGDYCTGIEGFLRFLAHCMVCVHCVGQACGTVDMFPQWNVWEITRMIFVPTI
AIQTLRYTTE
Protein IDpfu_aug2.0_1302.1_08310.t3
Definition-
>pfu_aug2.0_1302.1_08310.t3
MDSVMAFSSIFKKATHLLGLGTDNLKPPPLDGEIIYCKNNVCVHPPRPLSVMDPEQHHPGYLTLRSQSDEESGPTLILTW
IPNSTLKKNPRSIESSPNRSHATTPSPRRAPRQEFAKSQVQTPSPASSSPRGSCVSAGSDVGEHYYMDRAVTRKGKKLSI
DNSSMNSDDYTDSWSQPEDVNRKLSSSNKSQTDSGIGTEEVQNNEKSVPNKVSHKVGTNVNMLHSNKGNNAEGKVVNKEE
EFSSPDTSDGLTPEEQLAAMLNRNKLHSKARERFESNKSVSIEMNGDNLVVVTEELDHNQTAQKDTSIEDRNLNKNESKF
DTSSSSQSTDVEGVSLSSDSSHPSPSGAHYNKMLTDLKDKLEYDSSTCDSSDTLNTNYSNNSVTTPDISVTRCRYSSSSS
SLTSGPDSQPPSPDVSPPPSPTFIDNTENLESPSSCDSAQVSHNLTFPYNSVSYSTAKRDKKSAKDQVCGVFSVDLGQMR
SIRLFYMDSLCTTGQVVIASRESQYKILHFHHGGLDKLAEIFSDWNLFAKMKDKCNYFTESKEAEGQYKQFLIVRPQVTD
EQCHPEEGIYNMVGEEEWKCHMTSDGRIGEDFQLRKHIFFGGLEPTLRHESWPFLLHYYPYDSSFEEREQIRNDKYIEYQ
DIRKMRENMGEEEKDQFWRKIQSIVEKDVVRTDRSHPYFKGEDNPNIEVLHGCMIPARMEHFVELCSG

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Okinawa Institute of Science and Technology
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