Gene
| Gene Model ID | pfu_aug2.0_1305.1_18244 |
|---|---|
| Locus | scaffold1305.1 : 34719 ... 40845 : - |
| To GenomeBrowser | scaffold1305.1:34719..40845 |
| Genes list of scaffold | scaffold1305.1 |
| Synonym | pfu_aug1.0_20945.1_33147 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1305.1_18244.t1 | 4 | 1 | Fasciclin | 33 | 153 | 0.0 | 294.6 | 1.4e-26 | 1.0e-22 | 80.4 |
| pfu_aug2.0_1305.1_18244.t1 | 4 | 2 | Fasciclin | 167 | 256 | 0.0 | 294.6 | 1.4e-18 | 1.1e-14 | 54.5 |
| pfu_aug2.0_1305.1_18244.t1 | 4 | 3 | Fasciclin | 294 | 415 | 0.0 | 294.6 | 2.0e-27 | 1.5e-23 | 83.2 |
| pfu_aug2.0_1305.1_18244.t1 | 4 | 4 | Fasciclin | 430 | 549 | 0.0 | 294.6 | 3.9e-24 | 2.9e-20 | 72.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1305.1_18244.t1 | gi|676473282|ref|XP_009059767.1| | hypothetical protein LOTGIDRAFT_164994 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1305.1_18244.t1 | gi|657744159|ref|XP_008307255.1| | PREDICTED: periostin-like isoform X2 [Cynoglossus semilaevis] | 2.94273e-44 |
| pfu_aug2.0_1305.1_18244.t1 | gi|657744157|ref|XP_008307254.1| | PREDICTED: periostin-like isoform X1 [Cynoglossus semilaevis] | 2.94273e-44 |
| pfu_aug2.0_1305.1_18244.t1 | gi|554831934|ref|XP_005926524.1| | PREDICTED: periostin-like [Haplochromis burtoni] | 2.99878e-43 |
| pfu_aug2.0_1305.1_18244.t1 | gi|617451313|ref|XP_007568697.1| | PREDICTED: periostin-like isoform X2 [Poecilia formosa] | 1.00053e-42 |
Transcript
| Transcript ID | pfu_aug2.0_1305.1_18244.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1305.1_18244.t1 atgaatcaattcgctgcggcttttcttttgattagttttgtttctgtcaatgctcaaattgataaaaggaatgtgttaca gtacctagaagatggaaattttacaacgctggtaaatcttgtaaaaagggcaggtctagcagcacctttgtcaacaggct tgtacagtatcttcgctcccaccgatgaggcttttaagaagctcccagttgatgtcctcctgaagcttcaggctgaccca agcagtctactggacttccttcagttccacgtggtagggggtatagccatcaacaatatgttcaccaacggctcaacgtt tgacacattgaacaacaagactattcacatcattaagtacaaaaataatgccacggtagcgaatggtgttcccatatcga agaatgaagttatagtaagaaacggtgtcattcataaagtagaccgggtattgttacctctggagaagagtatatccgag tacctgggtgaacatgactcacagttccaggatctgtacgcggcattagtgctggaggggtacgaaaaagctctagaggg gggaaatttcacattatttgctccagaagatcatgccttttctagcataattgcagcacttccaaccattacagcggacg ataatttattcaaaaaaattctggctatgcatgtagtacccggggtatatttctcagctgctctcacggatggtatgaaa ctgacaacattggcgggaaatcaactgactgtgtcaatcaattccaaagagataagacctatgacaatgttttttgtatt atacggtgcgctgtcgcttttactaacgttatcattggcctctgacagcagggacattgttacctacctacaggaccata acttcaccgtaatcatcgatgatctgaacttagttggtctgacagataaactccgaaatgaaggaccattcaccgtattt gtgcccacggacgaagccttcctagaacttcccacggctttacgagatggtcttcataaagacctaccaaaactgaaaca catcgtcctgtcacacgtgctgtctgggggttacataggcccagtcatacccacaggatctgctcttactactctgtcag gacaacaacttcacttcagcaaagtacctgacgggtctgtttcagtgaacggtatagagttactaggtgctgatatagta gtaaagaatggagtgatacatagtattgagaaagtcctccttcctcccacagagaccgttatggagtacttggcgtcaca cagacaaaggctgtccataatagaatcactcatttatttagcaagaatggatagtacactacagggccaaggaccataca ccgtatttcttcccatagacgaagtgttcatgaataacaaaagtcaatttgctcatatatttggtgattccagtaagata agagaaatgatgatgaatcatgcagctaatggtaccctttacaccactgatttgaccgatggacaatcattacagacgat gggaaccaagtcattcgaggtgtccaagacatacaaaggattaaagatagaagatgcagaagtgatacagcctaatatac cagtcactaacggagtcattcacatcacggatagagttcttcaaccaaagtcgtag |
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Protein
| Protein ID | pfu_aug2.0_1305.1_18244.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1305.1_18244.t1 MNQFAAAFLLISFVSVNAQIDKRNVLQYLEDGNFTTLVNLVKRAGLAAPLSTGLYSIFAPTDEAFKKLPVDVLLKLQADP SSLLDFLQFHVVGGIAINNMFTNGSTFDTLNNKTIHIIKYKNNATVANGVPISKNEVIVRNGVIHKVDRVLLPLEKSISE YLGEHDSQFQDLYAALVLEGYEKALEGGNFTLFAPEDHAFSSIIAALPTITADDNLFKKILAMHVVPGVYFSAALTDGMK LTTLAGNQLTVSINSKEIRPMTMFFVLYGALSLLLTLSLASDSRDIVTYLQDHNFTVIIDDLNLVGLTDKLRNEGPFTVF VPTDEAFLELPTALRDGLHKDLPKLKHIVLSHVLSGGYIGPVIPTGSALTTLSGQQLHFSKVPDGSVSVNGIELLGADIV VKNGVIHSIEKVLLPPTETVMEYLASHRQRLSIIESLIYLARMDSTLQGQGPYTVFLPIDEVFMNNKSQFAHIFGDSSKI REMMMNHAANGTLYTTDLTDGQSLQTMGTKSFEVSKTYKGLKIEDAEVIQPNIPVTNGVIHITDRVLQPKS |
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