Gene
| Gene Model ID | pfu_aug2.0_1305.1_18247 |
|---|---|
| Locus | scaffold1305.1 : 66046 ... 73763 : + |
| To GenomeBrowser | scaffold1305.1:66046..73763 |
| Genes list of scaffold | scaffold1305.1 |
| Synonym | pfu_aug1.0_6473.1_52772 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1305.1_18247.t3 | 3 | 1 | EF-hand_1 | 28 | 34 | 8.5e-06 | 24.7 | 4.2 | 8800.0 | -3.5 |
| pfu_aug2.0_1305.1_18247.t3 | 3 | 1 | EF-hand_6 | 49 | 57 | 1.6e-06 | 27.4 | 4.7 | 10000.0 | -3.0 |
| pfu_aug2.0_1305.1_18247.t3 | 2 | 1 | EF-hand_7 | 106 | 130 | 1.6e-08 | 34.5 | 0.0002 | 0.43 | 10.7 |
| pfu_aug2.0_1305.1_18247.t3 | 3 | 2 | EF-hand_6 | 110 | 135 | 1.6e-06 | 27.4 | 5.4e-05 | 0.11 | 12.3 |
| pfu_aug2.0_1305.1_18247.t3 | 2 | 2 | EF-hand_7 | 111 | 168 | 1.6e-08 | 34.5 | 4.4e-11 | 9.3e-08 | 32.1 |
| pfu_aug2.0_1305.1_18247.t3 | 3 | 2 | EF-hand_1 | 111 | 130 | 8.5e-06 | 24.7 | 0.0086 | 18.0 | 4.9 |
| pfu_aug2.0_1305.1_18247.t3 | 3 | 3 | EF-hand_1 | 146 | 169 | 8.5e-06 | 24.7 | 1.8e-08 | 3.8e-05 | 22.6 |
| pfu_aug2.0_1305.1_18247.t3 | 3 | 3 | EF-hand_6 | 148 | 167 | 1.6e-06 | 27.4 | 1.6e-05 | 0.035 | 13.9 |
Transcript
| Transcript ID | pfu_aug2.0_1305.1_18247.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1305.1_18247.t1 atggcagacaaggaaagtgataggagaaagctggaatggaagttaatacggagcgatacaaaatttctggctttctttca aaagaaaaagcaaagagacgactcggcagcattattgaagaaagcattagaaacaaaaatagaaagggataaagaacatt tccgagcttattgtcaacgtttggatgtcgtcgtgccacggagatttgaacgtcaaattggaaacacagaaatcatcatg aaaaatacaggattaagttctaaacaactcagagctgtccttaaaatgcttcagattctgcagcattgctgtattaattc tgaaacattaggggttctagcctcggctctggtacaggttgactctgccatcacacatctggacctttcaggatgtaata aaagtttaagggaactgaatttgtcatggaatcacattcgcctgactggggcagtggatatcctgaaaggaatgaaggac aatcgccatattacaaagcttgacctttcctggaatggtcttggttttgagggatgcgtggctctttccgaggttcttgc tgataacgttactcttacagaactcaatgttacctgcaacaggatccaccctccggccatgctggagatggtgaaagggc tggcgagcaataaaactcttaaagttctagacttaagcaggaatcctataacaccaatgtttacggccgtgctactagac aggctgtccggggaatcagctcttcagaaactcattctcaagaatatagtggtcaatgacgagtttatgacactttatga agacatcaaatcaaaacgcgattttaagaatatagtggtcaatgacgagtttataacactctatgaagacatcaaatcaa aacgcgattttaaggtagtttacgaactgagtcttccggttcatatgatggacacacagaaaatggctagagaagtccaa gcaccctctaaattcaacctcgatccgcttcgtttactctatatgttgaaggaaaagaatcgggcacaagatttctttca caggatcaacaaagaccatgatgacgttgtcactccagatgagttgtgggaactctttcgggagtcggggattccagtta caactatggtcattgaaaagattataaactttatggataaaaacaacgatggctctattgatataagtgaatttctcgaa ggagataagaaaattcgaaaaatatcacgtgaccatgccaaggaccagcaccaacagaaagccagtgacaactatgctag gtattcaaggtcgttcaaacaaggacaaatagatcctatgacgtttagattacgggtcgatgaggtcaacaataaactgc cggttattgaatctcgcaatcccagcccgatgtccgataggaaaatgtctctcataagcaactataacgttaacgaggat gattag |
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| Transcript ID | pfu_aug2.0_1305.1_18247.t2 |
| Definition | - |
>pfu_aug2.0_1305.1_18247.t2 atggcagacaaggaaagtgataggagaaagctggaatggaagttaatacggagcgatacaaaatttctggctttctttca aaagaaaaagcaaagagacgactcggcagcattattgaagaaagcattagaaacaaaaatagaaagggataaagaacatt tccgagcttattgtcaacgtttggatgtcgtcgtgccacggagatttgaacgtcaaattggaaacacagaaatcatcatg aaaaatacaggattaagttctaaacaactcagagctgtccttaaaatgcttcagattctgcagcattgctgtattaattc tgaaacattaggggttctagcctcggctctggtacaggttgactctgccatcacacatctggacctttcaggatgtaata aaagtttaagggaactgaatttgtcatggaatcacattcgcctgactggggcagtggatatcctgaaaggaatgaaggac aatcgccatattacaaagcttgacctttcctggaatggtcttggttttgagggatgcgtggctctttccgaggttcttgc tgataacgttactcttacagaactcaatgttacctgcaacaggatccaccctccggccatgctggagatggtgaaagggc tggcgagcaataaaactcttaaagttctagacttaagcaggaatcctataacaccaatgtttacggccgtgctactagac aggctgtccggggaatcagctcttcagaaactcattctcaagaatatagtggtcaatgacgagtttatgacactttatga agacatcaaatcaaaacgcgattttaaggtagtgtacgaactgagtcttccggttcatgggatggacacacagaaaatgg ccagagaagtccaagctccctctaaattcaacctggatccgcttcggttactgtatatgttgaaggaaaagaatcgggcg caagacttctttcacaggatcaacaaagaccanctttga |
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| Transcript ID | pfu_aug2.0_1305.1_18247.t3 |
| Definition | - |
>pfu_aug2.0_1305.1_18247.t3 atgtttacggccgtgctactagacaggctgtccggggaatcagctcttcagaaactcattctcaagaatatagtggtcaa tgacgagtttatgacactttatgaagacatcaaatcaaaacgcgattttaagaatatagtggtcaatgacgagtttataa cactctatgaagacatcaaatcaaaacgcgattttaaggtagtttacgaactgagtcttccggttcatatgatggacaca cagaaaatggctagagaagtccaagcaccctctaaattcaacctcgatccgcttcgtttactctatatgttgaaggaaaa gaatcgggcacaagatttctttcacaggatcaacaaagaccatgatgacgttgtcactccagatgagttgtgggaactct ttcgggagtcggggattccagttacaactatggtcattgaaaagattataaactttatggataaaaacaacgatggctct attgatataagtgaatttctcgaaggagataagaaaattcgaaaaatatcacgtgaccatgccaaggaccagcaccaaca gaaagccagtgacaactatgctaggtattcaaggtcgttcaaacaaggacaaatagatcctatgacgtttagattacggg tcgatgaggtcaacaataaactgccggttattgaatctcgcaatcccagcccgatgtccgataggaaaatgtctctcata agcaactataacgttaacgaggatgattag |
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Protein
| Protein ID | pfu_aug2.0_1305.1_18247.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1305.1_18247.t1 MADKESDRRKLEWKLIRSDTKFLAFFQKKKQRDDSAALLKKALETKIERDKEHFRAYCQRLDVVVPRRFERQIGNTEIIM KNTGLSSKQLRAVLKMLQILQHCCINSETLGVLASALVQVDSAITHLDLSGCNKSLRELNLSWNHIRLTGAVDILKGMKD NRHITKLDLSWNGLGFEGCVALSEVLADNVTLTELNVTCNRIHPPAMLEMVKGLASNKTLKVLDLSRNPITPMFTAVLLD RLSGESALQKLILKNIVVNDEFMTLYEDIKSKRDFKNIVVNDEFITLYEDIKSKRDFKVVYELSLPVHMMDTQKMAREVQ APSKFNLDPLRLLYMLKEKNRAQDFFHRINKDHDDVVTPDELWELFRESGIPVTTMVIEKIINFMDKNNDGSIDISEFLE GDKKIRKISRDHAKDQHQQKASDNYARYSRSFKQGQIDPMTFRLRVDEVNNKLPVIESRNPSPMSDRKMSLISNYNVNED D |
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| Protein ID | pfu_aug2.0_1305.1_18247.t2 |
| Definition | - |
>pfu_aug2.0_1305.1_18247.t2 MADKESDRRKLEWKLIRSDTKFLAFFQKKKQRDDSAALLKKALETKIERDKEHFRAYCQRLDVVVPRRFERQIGNTEIIM KNTGLSSKQLRAVLKMLQILQHCCINSETLGVLASALVQVDSAITHLDLSGCNKSLRELNLSWNHIRLTGAVDILKGMKD NRHITKLDLSWNGLGFEGCVALSEVLADNVTLTELNVTCNRIHPPAMLEMVKGLASNKTLKVLDLSRNPITPMFTAVLLD RLSGESALQKLILKNIVVNDEFMTLYEDIKSKRDFKVVYELSLPVHGMDTQKMAREVQAPSKFNLDPLRLLYMLKEKNRA QDFFHRINKDXL |
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| Protein ID | pfu_aug2.0_1305.1_18247.t3 |
| Definition | - |
>pfu_aug2.0_1305.1_18247.t3 MFTAVLLDRLSGESALQKLILKNIVVNDEFMTLYEDIKSKRDFKNIVVNDEFITLYEDIKSKRDFKVVYELSLPVHMMDT QKMAREVQAPSKFNLDPLRLLYMLKEKNRAQDFFHRINKDHDDVVTPDELWELFRESGIPVTTMVIEKIINFMDKNNDGS IDISEFLEGDKKIRKISRDHAKDQHQQKASDNYARYSRSFKQGQIDPMTFRLRVDEVNNKLPVIESRNPSPMSDRKMSLI SNYNVNEDD |
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