Gene
| Gene Model ID | pfu_aug2.0_1305.1_18250 |
|---|---|
| Locus | scaffold1305.1 : 102027 ... 106345 : - |
| To GenomeBrowser | scaffold1305.1:102027..106345 |
| Genes list of scaffold | scaffold1305.1 |
| Synonym | pfu_aug1.0_14187.1_61322 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1305.1_18250.t1 | 1 | 1 | Ependymin | 159 | 278 | 4.2e-09 | 36.2 | 1.3e-12 | 9.4e-09 | 35.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1305.1_18250.t1 | gi|260803561|ref|XP_002596658.1| | hypothetical protein BRAFLDRAFT_78445 [Branchiostoma floridae] | 7.0e-18 |
| pfu_aug2.0_1305.1_18250.t1 | gi|291225513|ref|XP_002732744.1| | PREDICTED: ependymin-related protein 1-like [Saccoglossus kowalevskii] | 9.0e-14 |
| pfu_aug2.0_1305.1_18250.t1 | gi|260812455|ref|XP_002600936.1| | hypothetical protein BRAFLDRAFT_79126 [Branchiostoma floridae] | 7.0e-08 |
| pfu_aug2.0_1305.1_18250.t1 | gi|291225511|ref|XP_002732738.1| | PREDICTED: ependymin-related protein 1-like [Saccoglossus kowalevskii] | 9.0e-08 |
| pfu_aug2.0_1305.1_18250.t1 | gi|196017398|ref|XP_002118512.1| | hypothetical protein TRIADDRAFT_62546 [Trichoplax adhaerens] | 9.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_1305.1_18250.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1305.1_18250.t1 atggactctggttttattgagagcagtgacaataagatagggacgtacagatttacgtttggttcaataaatgccaatac gttagccactctacttctccatcctcgagagcagataaatnttagctacactgcatccgtttatcattcgtcaacaattt ttatcatgacaacagtaacaatatcatgtaacatactcattctacttgtttgcctgttgtctttcagggaattagaagcc tctaaatgttgcgcacctgaccaatgggaaagctccatttattttgattgggcacaagttttcatagaccaggattccaa acttcagaagcagcggtcgccggagactttgtacacgtattataatgcctcggggatcgtggcgtacgattacaccaatc ggcgtacttacatgaagctcagcggattcgaactcaccccactagtacctggacccgaaccttttgaatcgatcattttg aatgattacaacaagaatatgcagttccaagtgtcgggaagccattgtgacaaatctaacctggattcaaaaatgattaa acaatgtgttccagatgacgccgaggtgattgactctggttttattgagagcaatgtcaataaaatagagacgtacagat tcaagtttggttcactaaatgccaatacactagccactctacttattggtcaacaaggtacatgtttaccgatccatgct agtttctatgtgggaagtgttaatccaggttcagggactgtttacaacatggacgtaatgaatgcaactcgaggcataac agacacatcgatattccaacctccaaaacaatgtctatga |
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Protein
| Protein ID | pfu_aug2.0_1305.1_18250.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1305.1_18250.t1 MDSGFIESSDNKIGTYRFTFGSINANTLATLLLHPREQINXSYTASVYHSSTIFIMTTVTISCNILILLVCLLSFRELEA SKCCAPDQWESSIYFDWAQVFIDQDSKLQKQRSPETLYTYYNASGIVAYDYTNRRTYMKLSGFELTPLVPGPEPFESIIL NDYNKNMQFQVSGSHCDKSNLDSKMIKQCVPDDAEVIDSGFIESNVNKIETYRFKFGSLNANTLATLLIGQQGTCLPIHA SFYVGSVNPGSGTVYNMDVMNATRGITDTSIFQPPKQCL |
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