Gene
| Gene Model ID | pfu_aug2.0_1305.1_18251 |
|---|---|
| Locus | scaffold1305.1 : 107526 ... 113658 : + |
| To GenomeBrowser | scaffold1305.1:107526..113658 |
| Genes list of scaffold | scaffold1305.1 |
| Synonym | pfu_aug1.0_14187.1_61321 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1305.1_18251.t1 | 1 | 1 | Lectin_C | 211 | 330 | 5.2e-14 | 52.7 | 1.7e-17 | 1.3e-13 | 51.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1305.1_18251.t1 | gi|734611312|ref|XP_010733052.1| | PREDICTED: lactose-binding lectin l-2-like [Larimichthys crocea] | 4.0e-13 |
| pfu_aug2.0_1305.1_18251.t1 | gi|734611464|ref|XP_010733137.1| | PREDICTED: lactose-binding lectin l-2-like [Larimichthys crocea] | 1.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_1305.1_18251.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1305.1_18251.t1 atgttgataaaatctttaatgtttggtaattttatccttctggctttttctgccagtactcctaaagataaatgtatgtc aatgcacgtattccaaaccacgtacaatgctgtgaaggagaaaatccaggaaatgaacacgttagcagaacgtctgaaag aaaaactggatcagtcaattgacgacacatgcgatagcttggcaaatcaagtgacgtctaatccgtacaatctaacgtac tgtggttttgaggaggggtatgagaaatgtggctttacccaggggacagggaattatggtaattggaagttagacaaatc ctactacgtggaccatactattggcattaaatctggtacggaaggaggggttttaggtgttccggtatggcgaaaaatta ttgttacacccaactggacacttggagaattcagtcctgatccagaatacctacgcaagccattcaagatcgtgtttgaa gacaaaggaaaccattatattttgattgatgatatcatggtgtataacgtcggctgtaacagtccaggtgtccgttctcc aatctgtccggcgaattcgtacaaaaggacagacggacagacaacgacttgctacactcttcatctggaaccactgactt ggagggacgccatcttaagatgtaaggaattctggcccctggcttcactcgttgccatagagacggcatctgaagatatg tttataaggaacatggttgctaacggcacagacttggcggcggcagcagatttcggactatggacacgtggtaatgacat tgataaagagggaaactttgtatgggctgagaatcacagccaaccaaagccgttctcctacagcaactggcgttctggac agcctaataatgtaggtgacgatcaagactgtgtccttctccagtaccccatgaccggcctccagtggtctgacgtcagc tgctcggagaaacactcgtttatctgtgaagcttcgtacactcacgtgaaaggacattcttcagtaggaaatccattcgg ataa |
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Protein
| Protein ID | pfu_aug2.0_1305.1_18251.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1305.1_18251.t1 MLIKSLMFGNFILLAFSASTPKDKCMSMHVFQTTYNAVKEKIQEMNTLAERLKEKLDQSIDDTCDSLANQVTSNPYNLTY CGFEEGYEKCGFTQGTGNYGNWKLDKSYYVDHTIGIKSGTEGGVLGVPVWRKIIVTPNWTLGEFSPDPEYLRKPFKIVFE DKGNHYILIDDIMVYNVGCNSPGVRSPICPANSYKRTDGQTTTCYTLHLEPLTWRDAILRCKEFWPLASLVAIETASEDM FIRNMVANGTDLAAAADFGLWTRGNDIDKEGNFVWAENHSQPKPFSYSNWRSGQPNNVGDDQDCVLLQYPMTGLQWSDVS CSEKHSFICEASYTHVKGHSSVGNPFG |
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