Gene
| Gene Model ID | pfu_aug2.0_131.1_03681 |
|---|---|
| Locus | scaffold131.1 : 219174 ... 229563 : + |
| To GenomeBrowser | scaffold131.1:219174..229563 |
| Genes list of scaffold | scaffold131.1 |
| Synonym | pfu_aug1.0_95701.1_71445 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_131.1_03681.t1 | 1 | 1 | F5_F8_type_C | 13 | 140 | 1.5e-12 | 47.5 | 5.5e-15 | 2.8e-12 | 46.5 |
| pfu_aug2.0_131.1_03681.t1 | 2 | 1 | DUF1664 | 179 | 230 | 5.2e-09 | 35.9 | 8.4e-06 | 0.0043 | 16.8 |
| pfu_aug2.0_131.1_03681.t1 | 2 | 1 | Lectin_N | 186 | 225 | 7.2e-08 | 31.9 | 9.4e-06 | 0.0048 | 16.3 |
| pfu_aug2.0_131.1_03681.t1 | 2 | 2 | DUF1664 | 415 | 467 | 5.2e-09 | 35.9 | 2.9e-06 | 0.0015 | 18.3 |
| pfu_aug2.0_131.1_03681.t1 | 2 | 2 | Lectin_N | 423 | 461 | 7.2e-08 | 31.9 | 4.1e-06 | 0.0021 | 17.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_131.1_03681.t1 | gi|260785974|ref|XP_002588034.1| | hypothetical protein BRAFLDRAFT_83012 [Branchiostoma floridae] | 1.0e-18 |
| pfu_aug2.0_131.1_03681.t1 | gi|260812471|ref|XP_002600944.1| | hypothetical protein BRAFLDRAFT_79134 [Branchiostoma floridae] | 8.0e-18 |
| pfu_aug2.0_131.1_03681.t1 | gi|260812465|ref|XP_002600941.1| | hypothetical protein BRAFLDRAFT_79131 [Branchiostoma floridae] | 1.0e-17 |
| pfu_aug2.0_131.1_03681.t1 | gi|637365072|ref|XP_008120968.1| | PREDICTED: fucolectin-1-like [Anolis carolinensis] | 2.0e-16 |
Transcript
| Transcript ID | pfu_aug2.0_131.1_03681.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_131.1_03681.t1 atgagtaacttggcatacaagaagttgacattacaaagttcaacatttcaacataatggcaatttactgagctcagacaa agccgtagatggtatcaacatcacaaataacgaagttcatccttgcgccagcacaatgaaggaggcccgtccctattggt acgtggacctcggacaggaacatttcctcaaatatgtggagattgtgaacagaggggactgctgtcctgagcggttacat gatgttgaggtcacggtggccggacactataaggacttcaagaagccatgtggtttcttcaaaggacctggtactgccgg gcagatagttgttcttaactgtccccaggaaaccaagggtagatatatcaaaatacagattgtagacggcatagacaatt tccttacactctgtgaagtgttcattgacaataacgcattgcgtgacgctgtcctcagtactttgaaagaggccaaggtt cttgaagacctaaccgatcagatcttgcatggagtcaggaatgctatggctaaaaccaccaaaggtgaagttaacattgc cgtttccaatgtaaccaagtccttaaaaaccaaaattaaaagtcgagacgccactatctttgacttgtccaaacgtataa ctagccttgaaaaaagggtcgaagaacaagaacagtacagtaggagaacatgtctaagattctcaaacataccgtatgtt cttgatgacggatcctctccttctacgccaagtgaccttgacacttacaaaatagtattgaacatgtgtaacaaggacat gggcatcccagtcacactcgatcaaatcggtcgctcccatgttgtaggaacacccgataaaggtcgctgccagatcatcg cccgttttacctcatatcgtgttcgtcacaaagtgtatgttgccaaatctaaattgaaaaatgactcccaaaaacgttac atcgtagaagatttgactcgtactcgctacaacattgttaagcgtttaagccagttgccacgcacaggttcattgtctca atattggacatttgatggccgtgtatttgctcgtgaaactgacactgggcccaaaatacttctgaagaccatggaggaca tagaccgtagatttggagaaccaacaagggtaaaacaaaggaggggatctccaacaacaccaggttgtagcacccaanta accgatcagatcttgcatggagtcaggaatgctatggctaaaaccaccaaagatgaagttaacattgccgtttccaacgt caccaagtccttaaaaaccgaaattaaaagtcgagacgccactatcttagacttgtccaaacgtataactagcttagaaa aaagggtcgaagaacaagaacagtacagtaggagaacatgtctaagattctcaaacataccggagatgaagtataaattc atttctcctctccatggccttcaggaggtcggaggaccggtacagggcagcgcctcgtccccggatcctcgacaaccaga acgggccatctga |
|
Protein
| Protein ID | pfu_aug2.0_131.1_03681.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_131.1_03681.t1 MSNLAYKKLTLQSSTFQHNGNLLSSDKAVDGINITNNEVHPCASTMKEARPYWYVDLGQEHFLKYVEIVNRGDCCPERLH DVEVTVAGHYKDFKKPCGFFKGPGTAGQIVVLNCPQETKGRYIKIQIVDGIDNFLTLCEVFIDNNALRDAVLSTLKEAKV LEDLTDQILHGVRNAMAKTTKGEVNIAVSNVTKSLKTKIKSRDATIFDLSKRITSLEKRVEEQEQYSRRTCLRFSNIPYV LDDGSSPSTPSDLDTYKIVLNMCNKDMGIPVTLDQIGRSHVVGTPDKGRCQIIARFTSYRVRHKVYVAKSKLKNDSQKRY IVEDLTRTRYNIVKRLSQLPRTGSLSQYWTFDGRVFARETDTGPKILLKTMEDIDRRFGEPTRVKQRRGSPTTPGCSTQX TDQILHGVRNAMAKTTKDEVNIAVSNVTKSLKTEIKSRDATILDLSKRITSLEKRVEEQEQYSRRTCLRFSNIPEMKYKF ISPLHGLQEVGGPVQGSASSPDPRQPERAI |
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