Gene
| Gene Model ID | pfu_aug2.0_131.1_03682 |
|---|---|
| Locus | scaffold131.1 : 234702 ... 236103 : - |
| To GenomeBrowser | scaffold131.1:234702..236103 |
| Genes list of scaffold | scaffold131.1 |
| Synonym | pfu_aug1.0_2350.1_08303 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_131.1_03682.t1 | 1 | 1 | rve | 111 | 197 | 2.0e-17 | 63.4 | 3.6e-21 | 2.7e-17 | 62.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_131.1_03682.t1 | gi|749164349|ref|XP_011133803.1| | putative Pol polyprotein, partial [Gregarina niphandrodes] | 4.0e-23 |
| pfu_aug2.0_131.1_03682.t1 | gi|449688264|ref|XP_004211700.1| | 5.0e-23 | |
| pfu_aug2.0_131.1_03682.t1 | gi|512925494|ref|XP_004930853.1| | 1.0e-22 | |
| pfu_aug2.0_131.1_03682.t1 | gi|542263723|ref|XP_005466514.1| | PREDICTED: uncharacterized protein LOC102075523, partial [Oreochromis niloticus] | 2.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_131.1_03682.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_131.1_03682.t1 atgttttctcacgacgaccccgtcgtcgttgaatttgaatatacatctcaaacggtagcctcggttgagactattccaaa tgatgttcagctaaccattccgaaagaaggtaacttagctaaacttcaaaaacaatgcgaagatttcaaagacatatatc aatatctagagagtgatatcctgccggatgacttcagaaaaagaaaacaggtattttcaaaagctgaatattacagtctt tgcaatggtgtattatatcattggttccaaagtagactaagtaaagcgtcaagtcacgacaagtggatcagacaattggc gcttcccaaagtcttacactcatttacaagatggatagaagcctttcctgtgaagacacaggatagcaaacaagtagcaa aggtattatttgaacaaattttttctaggtttggtgcacctaagaaggtagtttccgattacggtaagcagttcacatca aatctcatcctgtcactatgcgaaatcgtcaatgtcaaacgacatattacatcagcttaccatccacaaacaaacagctt ttgtgaacgaaacaacagaacaatcatacaggcactaagagcatactgtgacaaagatcaaaacaactggccatcaaaac taccaggcattctcatggcattacgatattcaccatgtacacaatcaacagaacattcactctactacatggcattcggt agagaaatgaattaa |
|
Protein
| Protein ID | pfu_aug2.0_131.1_03682.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_131.1_03682.t1 MFSHDDPVVVEFEYTSQTVASVETIPNDVQLTIPKEGNLAKLQKQCEDFKDIYQYLESDILPDDFRKRKQVFSKAEYYSL CNGVLYHWFQSRLSKASSHDKWIRQLALPKVLHSFTRWIEAFPVKTQDSKQVAKVLFEQIFSRFGAPKKVVSDYGKQFTS NLILSLCEIVNVKRHITSAYHPQTNSFCERNNRTIIQALRAYCDKDQNNWPSKLPGILMALRYSPCTQSTEHSLYYMAFG REMN |
|