Gene
| Gene Model ID | pfu_aug2.0_131.1_03685 |
|---|---|
| Locus | scaffold131.1 : 439536 ... 462106 : + |
| To GenomeBrowser | scaffold131.1:439536..462106 |
| Genes list of scaffold | scaffold131.1 |
| Synonym | pfu_aug1.0_144.1_22029 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calcitonin gene-related peptide type 1 receptor-like | GO:0001525 GO:0001756 GO:0004930 GO:0005886 GO:0007186 GO:0016021 GO:0048844 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_131.1_03685.t1 | 1 | 1 | 7tm_2 | 76 | 317 | 4.2039e-45 | 153.8 | 0.0 | 5.60519e-45 | 153.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_131.1_03685.t1 | gi|37496575|emb|CAD82836.1| | 0.0 | |
| pfu_aug2.0_131.1_03685.t1 | gi|676425977|ref|XP_009044476.1| | hypothetical protein LOTGIDRAFT_109332, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_131.1_03685.t1 | gi|676427753|ref|XP_009045050.1| | hypothetical protein LOTGIDRAFT_170937 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_131.1_03685.t1 | gi|676478050|ref|XP_009061311.1| | hypothetical protein LOTGIDRAFT_234777 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_131.1_03685.t1 | gi|432931641|ref|XP_004081714.1| | PREDICTED: calcitonin gene-related peptide type 1 receptor [Oryzias latipes] | 7.00649e-44 |
Transcript
| Transcript ID | pfu_aug2.0_131.1_03685.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_131.1_03685.t1 atgatgaatgtcaacagtggacttcctgttgcgcagccgcagatgaatgttgtaagcgtcagcaatcacaatcaaaagga aagaactcttcctgtcctagaatctgggatggctggtcgtgttttgacgatgccctccctggctcaaaagtatatactag ttgtccgtcattccttcagttgtctctaccatcaagagctagagacctccctgctactaggatttgggtgttctgtcgtc agcattgtgttcattatacctgcaatcttcattttcctcatttacaaattgttgagaaaacagcacaggatccggcttca tgtcaatctgttcatagctctacttctgaaggagctgatgaccgttctctgggacatgttagtaacgtatgataaactga agaatgaagaagtattcgacacagtattgatgaaaaatgaggttggttgtaaaattctgatgtttctgaaactctacttc aactgctgttgttttacctggatgttttgtgaggggttctatctacacagactgatgagtaacgccttctctcctcccag atctcttattcccgtctatcttgctggttggttacttccccttactacatctaccctctacagcatattacggggaatct acgcaaacgacagatgttgggcgcttccatttaataatctagagtggatagtttcagctccgaatctcctttttctagtg ataaatgtaatattcctttgtaacatcctacgaatacttcttactcaagtacagtcgcacacaaacgaaccaggcacatt cagacgagctgtaaaggcaacattcgtattgatacctttatttggagtccagttatttgtcacagcgtatagagttccaa cgacagtaccaggaggcctagaatatgaaagattttcgatgatcgtcaacaatttacagggctttctcgtcgcattggtg ttctgctttcttaatggagaagtatgtttgattttaaaacttttcctataa |
|
Protein
| Protein ID | pfu_aug2.0_131.1_03685.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_131.1_03685.t1 MMNVNSGLPVAQPQMNVVSVSNHNQKERTLPVLESGMAGRVLTMPSLAQKYILVVRHSFSCLYHQELETSLLLGFGCSVV SIVFIIPAIFIFLIYKLLRKQHRIRLHVNLFIALLLKELMTVLWDMLVTYDKLKNEEVFDTVLMKNEVGCKILMFLKLYF NCCCFTWMFCEGFYLHRLMSNAFSPPRSLIPVYLAGWLLPLTTSTLYSILRGIYANDRCWALPFNNLEWIVSAPNLLFLV INVIFLCNILRILLTQVQSHTNEPGTFRRAVKATFVLIPLFGVQLFVTAYRVPTTVPGGLEYERFSMIVNNLQGFLVALV FCFLNGEVCLILKLFL |
|