Gene
| Gene Model ID | pfu_aug2.0_1310.1_01538 |
|---|---|
| Locus | scaffold1310.1 : 127837 ... 143565 : - |
| To GenomeBrowser | scaffold1310.1:127837..143565 |
| Genes list of scaffold | scaffold1310.1 |
| Synonym | pfu_aug1.0_8859.1_02662 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1310.1_01538.t1 | 4 | 1 | Helitron_like_N | 297 | 331 | 9.0e-24 | 84.2 | 7.7 | 14000.0 | -4.5 |
| pfu_aug2.0_1310.1_01538.t1 | 4 | 2 | Helitron_like_N | 362 | 435 | 9.0e-24 | 84.2 | 8.0 | 15000.0 | -4.9 |
| pfu_aug2.0_1310.1_01538.t1 | 4 | 3 | Helitron_like_N | 400 | 473 | 9.0e-24 | 84.2 | 6.7 | 12000.0 | -4.3 |
| pfu_aug2.0_1310.1_01538.t1 | 4 | 4 | Helitron_like_N | 981 | 1139 | 9.0e-24 | 84.2 | 4.9e-27 | 9.0e-24 | 84.2 |
| pfu_aug2.0_1310.1_01538.t1 | 1 | 1 | PIF1 | 1612 | 1942 | 8.0e-29 | 100.7 | 3.5e-30 | 6.4e-27 | 94.4 |
| pfu_aug2.0_1310.1_01538.t1 | 1 | 1 | AAA_30 | 1612 | 1827 | 2.0e-13 | 50.4 | 2.8e-16 | 5.2e-13 | 49.0 |
| pfu_aug2.0_1310.1_01538.t1 | 1 | 1 | AAA_19 | 1637 | 1698 | 5.3e-06 | 26.0 | 6.1e-09 | 1.1e-05 | 25.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1310.1_01538.t1 | gi|34365516|tpg|DAA01284.1| | TPA_exp: replicase/helicase/endonuclease [Danio rerio] | 0.0 |
| pfu_aug2.0_1310.1_01538.t1 | gi|34365524|tpg|DAA01287.1| | TPA_exp: replicase/helicase/endonuclease [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1310.1_01538.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1310.1_01538.t1 atgcctaggaaaaagttttggaggagaggagcaactcaaaagaagggggatagccacccctccaacaagggcttgacgat tgacaatgaccaggttaaacctcctgtaaaaaaggtcatggacgaccaggttaaacctcctgtaaaaaaggtcattggtg accaggtactgtatgaaggagataatttgtataaaaaagttgtaatggacttgaaaagagagggaagatacgtaaattct ctgctatctttcaatgaacttccttcagctttagaatacaaagacaaatattattcagtcaatcattattcctctatata tggtgtatcaattgtggaaaacaacaccgaagctctatccttacatgaaggaatcatatttggtcttgcaaagtcacaac acttacttatcatgtatggagctctgtgttctgcaattatgtttatagatggaaagtacttattttttgattctcattca catggagatgatggtctgaatgcaccagatggaaaatcgatgctgaaagtgttttcttccattgacaatttaattgcatt tttgtattcattttacaccagctgtaatatagacttgcaatctcagtttgaaatattgcctgtcgttgttaatctaattc agcatgatttcttacaagaacagatgagttatcaaaatggtcaagcagagtctcatggttcaaaatcaaatgaaaaaaac tgtctgtcaagaaacaaaaatagtgaacagtatatagatatagaaggacaaagaaatttgcatgttgaccgaaaattgaa ggcaaacataagatatcgagaaaaagaactattgggtaaaagaaaggtgattgatgatgatacattttatgacaaagaca ttgttgacaaaaggaaaaactacatgagagattatatgcaaaaaaggcgcaaatgttctaaattcaaacttcaagaagca agagctaagaaagagactagatgtgaaaatgagtatcgacaaaatgaaagagagagagaattatctgcaaaaagaaagtg cagaaaagatcaacagtataaaaagaaagaattaactgcaaagaggatgaaaagggcagatatgcagtgccgaaacgatg aaagaaaaagagagttaactgcgaagagaattaaaagagaagatgaacagtataaacagaatgaattatctgcaaagagg atgaaaagggcagatatgcagtgccgaaacaatgaaagaaaaagagagttaagtgcgaagagaattaaaagagaagatga acagtataaacagaatgaattatctgcaaagaggatgaaaagggcagatatgcagtgccgaaacaatgaaagaaaaagag agttaagtgcgaagagaattaaaagagaagatgaacagtataaacagaatgaattatctgcaaagaggatgaaaagggca gatatgcagtaccgaaatgatgaaagaaaaagagagttaattgcgaagagaataaaaagggcagatatgcagaaccgaaa ttatgaaagaaagagagaattggcctccaaaaaatttatgagaaaaaacaggatctttagactgaaggagagattaattg agcttcaaagtaagagaaatgccagagaaaataagttatttttagaagctgaaagattgaaaaagagagaacttagaaaa tcaaaggctgacaagatgtgtttacgtgaaagggagtcagataagaatagaaaaataaataatcgaagcatcaagtcata caagaaaaaggagaaggacattgagaacattaagaaatatggatcaaatattatggaatgtattagaatttttcatgcat gtacaagtagtggtcccgtttatgtttgctctgtatgccatcagacatggttctatgatagtgttcataaagttgttaat ataataaaggttgacttcaaacctgggattcttactggacttaagtctgcagaggacaaggaatggatttgtagaacttg cctctcaaatgtaaagaatgataaagttcctaaagtatcagttctaaatggaatgaaatggcctgatcaacctcctgaat taaaattacatcctatggaagaaagagtcattgctcttagaatcccttttatgcaaatgagagaattgcctagaggaggt caattttgtgtcaaaggcaatgtgattaatgtacctgttgatatacaaccaactataaaagctctccctagacaagtaga tgaaacatgcactatacctgtgaaactgaaaaagaaaatgacatacaagaaggttgactttacggaaaatattagaccag ctgttgttttgtctgctcttcattggctaatgtcaacaagtgaattatacaaagattcaggtgttaatattgataacagt tgggagaacactatcacaagagattgtcgagagatagttcaagagtttctaagtggaaattcaacaattaataatgatag aaatggctatcatgagaacactaaaaactcaagtgaagaagtgaatgatcagttgatagtaaatgataaagatgccgaag atgaaacaggctacgaatctgatcattttagtgaaattgatagcaatgaaattgtcacgggcaatgcagacaccttgtta gaggatgaagctttgaatacggacaagtcctatacatttgctccaggtgaaggacaacaccctttaagtttgttcaccga taaagatgcagagtttctctcatttccaacaatttattgtggacaaagacggcttgaaaataaagagagattggtacctg tgcattatagtgatattgctaagtgggaacttagaagtgttgatcgtagagcagcacgatctgttcctaatatttttttt aaattgaagaaaattcaattaaaacaaataagcgacaaagttcaattggcagtaagaagaattaaaacaaaggggaaaaa aataaccgctgctgaagccagagatcagtcaacacttgataatattgtgcggttagatgaaggatattatatttttagac aacttcgcaactctcccgcttacttagcaaccaaaaagaaagatgtgtttgctatgattagacaaattgggctgccaaca tggttcatgtctctttcttcagcagacacacgatggccatttttattaaaagctcttgctaaactcgatggaaaaattct atcagattcagacataaagaatttgtcctggcaagaaaaaagcagtttagtacaaaaggatcctgtcacttgttctcgga tctttaatgatagagtacagcagtttattaaagtgttcctgaaaagcccccatgaacctattggtgttgtaactgattac ttgtaccgtgttgaatttcaacaaaggggttctccgcatatacatatgcttgtatggatagctgatgcgccaaagtatca gaaagaccataatgagtcaatagaacaatttgttgaccaatacattacatgttcaaatgaaaaagaagagttgtgtggtt taattgatctgcaaacacacaagcattccaagacctgtagaaagaagggcaaagctgtatgtaggtttgggtttccgctt cctccattacgtaagactatgctgttagaaccactagagacagatattgacaagcacaaaaagaaatatgatgaaatcca aaataagatcaattcattcaaagatggcatgaacttttcatttgatcagtttttgaatgaaattgtaggaatgtcagaag acgaatacatcaagtgtattagaagctctatcaacggccctaaagtgtttctgaagagaatgccctcagaaatcagagtc aatatgtacaatgaacatgtactcatggcatggaatgctaatattgacttacaatatgtgttggatccgtatgcatgtgc catgtacattgtatcttacattagtaaatctcaaagaggaatgagcgctttgatggacagagcatgcaaagaagcaagac aagggaacatggatataaaaaaacaagttcgtcatatcggtaaccattttttgaatagtgtagaagtcagtgcacaggaa gcatcctatttagtattacaaatgcctctaacgaagggttcaagagatgtgatattcattaatacgtctccaccagaaga aagagtctttcttttaaagcaattgtctgatcttgaagagcttagtcccaactccaccgatatccattaccaaaatataa ttgcaagatattccaaaagacctagacaactagagaactggtgccttgcagactatgcatcacagcttgaagtgaaatat ccaaaagacaaaaataaaattgacgaagaagagataaatgatgatgacattgaagtagatgaagatgatgacttggaatt ttccgaggatgatactcttgtcactcttaaaagtgggataataataaggagacgtatacatgacctgattttgcgatatg tacgatacagcgttaagacggatccagaaaaccattatcgagaaaaactgcttctgttcataccttggagagatgaaaat aattttgacgagattgaacgagctattcaacaagcggaggaagaattcgaacaacacgatgaattagctccaaatgcaca acaaacaaatgcagaagatgaagctgaaggcccacatgaatccgaacaatatgtacattttaaccctgaaaggcccctcg agcacagacaatatgatttaggtactgatattggtgcttcaacttctgttccatgcattgaatgccatagcgacagagtg tctgatgaacaatatttaaaactgatcaggagcttgaatatcaaacaaagagaattcttcactcatgtcctccattggat caagactaaagatgagccaatttatgcatttttatcaggaggtgctggtgttggaaaatcagtattgatcaaagctatct accaagctttacacagacagctacactcagcagatggagaagatccaagtgacatcagaatattactttgtgcatttacc ggaaaagcagcatataacatcaatggcattacaattgcctctgcgttccacaagaagtataaccagacaaaccagtcaat gagctccgatgaactgaatactttccgaatgaagtacagaaatctatctgttgtgataattgatgaaatttcaatggttg gtggcaagatgttaagcttcattgactgtagattgaaacagttaactggaacaaataaaccatttggtggaataagcata attgctgttggagacctgtatcagttgcaacctgtaggggattcatggatatttaatgacttgtctattggacctcaagt tctagcaacaaacttatggaaagaacatttctctttgtttgaattaacggaaatcatgagacaaaaagatgacacagatt ttgccaaccttctgaacaggttacgaacgaatgatttaactgcaaaagacaaaaacgaaattaataaacatattatcagc cctacacaggaaaactacacgaataatgcaccgcatttgtttattgaaaacaagtttgtagacagcttcaacagagagtt tatgcaaaatttaagtacaactaaagttgaagttgccagtcatgattctgtaatagcagatgttccgaaatcaaacaaag aaagacttctcaaaagccttccaaatgattcgagcaaaactgcaaatttagcacgttcgctaattgttgcaactaatatg atttatgacattaccattaatcttgatgtaaatgatgggatagcaaacggttctagctgtattgttaaattcatagaaaa ccgaattcctcaaacaacaagaccaagcattgtttgggttctgtttaacgacctttctattggatccaacacaagacaga agtataaacatttgtaccacagagaaattgacccatcatggacacccatttttgaagttaatcgcaattttctctacaat tataaatcttttcagagaacacaatttccacttaaaccagctgcagcaaaaactgttcacaaatcgcaaggatgtacagt agacaagctggtcattgatttatcgcaaacaagaacaaggaaaattcctcatatacattatgtagcaatgagtagagtaa gaaaatttgaaaatcttcaaattttaaattttaatagtgatgcacttacagctgatgaacgagtcaaagacgaaatgaaa agacttcgagaagaggcacccatgaaattatgttacactcctttatataaagtagatccatgcagatttaaaatagcttt taacaatgcgagatcgcttcacaggcatttccatgatatttctctagatccaaatatctctgccgcagacattattggta ttacagagtcaaggttatgctctttagatcataatgaaacatattcactcgaaggttttgaaatgatcagatgtgatcag aacattcaggcaacgaacagaagaccaagtcatggacttgtgttatatttgagatatggcttactgactagagaaatatt caagtacatctctgacaatttggaatttttgatatgtgagacatctcattcagtagctggattctttcaactagtgcttg tgtacaaatctccggatcacatagagttccgaataaacgcgggaaacatagcgtaccttgactgtcagagcgacaagatg gcgaaaagaaagctgttcgacgacgacgtaatgacaggctacctgttacaaatatcaaaagtagaaacatctgctagtgg aaaaacaaagtatttctcggcccttctacaaaatgacaaaaatgaagcacgcaggcttgtgtgttttcatcctgaaaaac acgagctattcgtaagagccaaagaaattgacaggcctgtgcgtctacataaagccaaacttacgcctggaagagatggg atggaagtgaggtttcagagagagagttctcttgagattttacaagccccaatttcttttccaaaacttcaaacacttgg agaatcatcaagggacgatggcggacctaaccaacacttgtgcgaattaaaaacggaaaacatgagggttacagtgaagg tgaaaatagttggtttcctcacaaataaaaaggaaacaccaacaaaatatggattaaaatataccagagaagctgcagtt gctgacccaacaaagtccatgaggattacattttggggagacacctcagaattggttcaaaccggtaaatcatacctgat atcacatgtctcaaccagaatgtttaatggtgaactgacgttaaacacaacaatgtcaaccaaaatttctcaaatagaag acgtagaggacccaaaagaagacctcactttcattgaagaaaaggaagaaataatctcaataagccaaatcaagataaca caaaattacaaatgttgcaatacctcgtgcaataagaccatcccagaaattgactttcagaattcattcatacgttgcca agcttgccaaatgaaacaaagcataaagaaaatgaaaagagcaacaaccgcatttctcaatgtaactctggaaaattcta caacaacaaaatttgtaatctttgaagaagcattgcacaaattccttgatttggaaaaaaatgcacaattactagaaaat ccagaccaattggaagatcacctcttggagattgaacaattcaaagtgtcccatcaaagccacagtgatgtactctctaa aatcaacagaattgcggtctctaatcagtcagagtga |
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Protein
| Protein ID | pfu_aug2.0_1310.1_01538.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1310.1_01538.t1 MPRKKFWRRGATQKKGDSHPSNKGLTIDNDQVKPPVKKVMDDQVKPPVKKVIGDQVLYEGDNLYKKVVMDLKREGRYVNS LLSFNELPSALEYKDKYYSVNHYSSIYGVSIVENNTEALSLHEGIIFGLAKSQHLLIMYGALCSAIMFIDGKYLFFDSHS HGDDGLNAPDGKSMLKVFSSIDNLIAFLYSFYTSCNIDLQSQFEILPVVVNLIQHDFLQEQMSYQNGQAESHGSKSNEKN CLSRNKNSEQYIDIEGQRNLHVDRKLKANIRYREKELLGKRKVIDDDTFYDKDIVDKRKNYMRDYMQKRRKCSKFKLQEA RAKKETRCENEYRQNERERELSAKRKCRKDQQYKKKELTAKRMKRADMQCRNDERKRELTAKRIKREDEQYKQNELSAKR MKRADMQCRNNERKRELSAKRIKREDEQYKQNELSAKRMKRADMQCRNNERKRELSAKRIKREDEQYKQNELSAKRMKRA DMQYRNDERKRELIAKRIKRADMQNRNYERKRELASKKFMRKNRIFRLKERLIELQSKRNARENKLFLEAERLKKRELRK SKADKMCLRERESDKNRKINNRSIKSYKKKEKDIENIKKYGSNIMECIRIFHACTSSGPVYVCSVCHQTWFYDSVHKVVN IIKVDFKPGILTGLKSAEDKEWICRTCLSNVKNDKVPKVSVLNGMKWPDQPPELKLHPMEERVIALRIPFMQMRELPRGG QFCVKGNVINVPVDIQPTIKALPRQVDETCTIPVKLKKKMTYKKVDFTENIRPAVVLSALHWLMSTSELYKDSGVNIDNS WENTITRDCREIVQEFLSGNSTINNDRNGYHENTKNSSEEVNDQLIVNDKDAEDETGYESDHFSEIDSNEIVTGNADTLL EDEALNTDKSYTFAPGEGQHPLSLFTDKDAEFLSFPTIYCGQRRLENKERLVPVHYSDIAKWELRSVDRRAARSVPNIFF KLKKIQLKQISDKVQLAVRRIKTKGKKITAAEARDQSTLDNIVRLDEGYYIFRQLRNSPAYLATKKKDVFAMIRQIGLPT WFMSLSSADTRWPFLLKALAKLDGKILSDSDIKNLSWQEKSSLVQKDPVTCSRIFNDRVQQFIKVFLKSPHEPIGVVTDY LYRVEFQQRGSPHIHMLVWIADAPKYQKDHNESIEQFVDQYITCSNEKEELCGLIDLQTHKHSKTCRKKGKAVCRFGFPL PPLRKTMLLEPLETDIDKHKKKYDEIQNKINSFKDGMNFSFDQFLNEIVGMSEDEYIKCIRSSINGPKVFLKRMPSEIRV NMYNEHVLMAWNANIDLQYVLDPYACAMYIVSYISKSQRGMSALMDRACKEARQGNMDIKKQVRHIGNHFLNSVEVSAQE ASYLVLQMPLTKGSRDVIFINTSPPEERVFLLKQLSDLEELSPNSTDIHYQNIIARYSKRPRQLENWCLADYASQLEVKY PKDKNKIDEEEINDDDIEVDEDDDLEFSEDDTLVTLKSGIIIRRRIHDLILRYVRYSVKTDPENHYREKLLLFIPWRDEN NFDEIERAIQQAEEEFEQHDELAPNAQQTNAEDEAEGPHESEQYVHFNPERPLEHRQYDLGTDIGASTSVPCIECHSDRV SDEQYLKLIRSLNIKQREFFTHVLHWIKTKDEPIYAFLSGGAGVGKSVLIKAIYQALHRQLHSADGEDPSDIRILLCAFT GKAAYNINGITIASAFHKKYNQTNQSMSSDELNTFRMKYRNLSVVIIDEISMVGGKMLSFIDCRLKQLTGTNKPFGGISI IAVGDLYQLQPVGDSWIFNDLSIGPQVLATNLWKEHFSLFELTEIMRQKDDTDFANLLNRLRTNDLTAKDKNEINKHIIS PTQENYTNNAPHLFIENKFVDSFNREFMQNLSTTKVEVASHDSVIADVPKSNKERLLKSLPNDSSKTANLARSLIVATNM IYDITINLDVNDGIANGSSCIVKFIENRIPQTTRPSIVWVLFNDLSIGSNTRQKYKHLYHREIDPSWTPIFEVNRNFLYN YKSFQRTQFPLKPAAAKTVHKSQGCTVDKLVIDLSQTRTRKIPHIHYVAMSRVRKFENLQILNFNSDALTADERVKDEMK RLREEAPMKLCYTPLYKVDPCRFKIAFNNARSLHRHFHDISLDPNISAADIIGITESRLCSLDHNETYSLEGFEMIRCDQ NIQATNRRPSHGLVLYLRYGLLTREIFKYISDNLEFLICETSHSVAGFFQLVLVYKSPDHIEFRINAGNIAYLDCQSDKM AKRKLFDDDVMTGYLLQISKVETSASGKTKYFSALLQNDKNEARRLVCFHPEKHELFVRAKEIDRPVRLHKAKLTPGRDG MEVRFQRESSLEILQAPISFPKLQTLGESSRDDGGPNQHLCELKTENMRVTVKVKIVGFLTNKKETPTKYGLKYTREAAV ADPTKSMRITFWGDTSELVQTGKSYLISHVSTRMFNGELTLNTTMSTKISQIEDVEDPKEDLTFIEEKEEIISISQIKIT QNYKCCNTSCNKTIPEIDFQNSFIRCQACQMKQSIKKMKRATTAFLNVTLENSTTTKFVIFEEALHKFLDLEKNAQLLEN PDQLEDHLLEIEQFKVSHQSHSDVLSKINRIAVSNQSE |
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