Gene
| Gene Model ID | pfu_aug2.0_1311.1_04955 |
|---|---|
| Locus | scaffold1311.1 : 43916 ... 48234 : + |
| To GenomeBrowser | scaffold1311.1:43916..48234 |
| Genes list of scaffold | scaffold1311.1 |
| Synonym | pfu_aug1.0_32569.1_26607 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cre-tyr-1 protein | GO:0003824 GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1311.1_04955.t1 | 1 | 1 | Tyrosinase | 136 | 314 | 4.8e-25 | 89.0 | 2.9e-28 | 2.1e-24 | 86.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1311.1_04955.t1 | gi|308459202|ref|XP_003091925.1| | CRE-TYR-1 protein [Caenorhabditis remanei] | 0.0 |
| pfu_aug2.0_1311.1_04955.t1 | gi|268575414|ref|XP_002642686.1| | Hypothetical protein CBG12272 [Caenorhabditis briggsae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1311.1_04955.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1311.1_04955.t1 atgatcatttcagccgtggcaattctgatttcttattttggtgcaggactagctttcatagaagaaatcccccttccttc cgattacgaacaatgtctggacacacaataccgtagaacggatttaacccgatccgttggatatcatgtatattggcgat gtaagcaaaagtccgccatgcgctatgctatggaatcgggaaccaatatgacatacgaagaataccgatatatgatcagt ttacttccgccgcggaatttattcttttcgagtggcttcaaggattttcatcatccaaatgctgagcctcggatccggaa ggagtacaggcgaatgacggagagcgagagaaacgcgtatcatcatgctatcaatttgctgaaaagaataccgcttggaa aatcgaatagatacgatgttcttgctgccattcaccaaggcggtgccataggagttgcacatgaaggtccgaatttcctt ggctggcacagggtctatctcttgatatatgaaaatgcgttgcgccaagtcgtaccaggtgtgacggtaccttactttgc cggagagttggatgggagaatgcgcgactcgaaaaagtccgttcttttctctgagaagttcttaggaacagggaggggtg cagtaagaactggaccgtttcgtaattttaaaacagaaagtggtcccctagtgagaaatatagccgaggatggacaacta tggacggacgaaggtctggagcgcatcctgaatcaatcgtctgtagcagatattactacgccgaacgcagccgacgagaa cagtatagagcggcaacatgacgatatccacggctggttaggagggggagtggggcaaattggggaattagaagagtctt cgcaagatcccgtgttcttcaatttacatgcttatgtagatttcatttttgaaaggttcagagatcgtttacttttgcga ggtaaggaccccgctgatgactacccgaagaactttggtgacgaaaggcattctccaactgcaagaatgggatttggaaa cattctaaattatgaaggttacagtaatggattagcctccgtggttcactacgagcctgtacccacgtgcagtaaggcaa aaccgtattgtggttcgaaatatctggtgtgtaacacacgggcaaacccgtgtcgatgtgagtcgagaacgactgcacaa gtccgtcgtatgcagtcgagaaacaaggacgattttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngacgatgagg acacatgcgaaacgaacgaggcaatgcaaaaccgataccgttgcgaccagagtaatgatatccggaaatttgttttcgtt cctgttgaggtcatttcacgccgaccccccgagaaatcgacgtataattcatatccggtttttaacagcaaagtgtatac aaaattaggagacatttatagtccaaaaacatacggaatagacgacatgttgccgacaggaaaatgtgcgacttacacaa gatgcgaaaatgaatacacaccgagcgctgggaaaatattcgtcgaagcaaatggtctgaattatcagggacaatatact gacttcgctgttattgataccagactagcactatcaagttctacgtcatatgttgccgtcaaatctcccgagattggaaa aacggaagtgttattgtctgcgcgtgacgtttgcggacgcatgtgcaaagcatactgccgccattttacgccgacaggaa ctgaatatagattatgcaatggtgctattcgcgttacatcgcaggcaccgaaactttacggcagaaattacggagaaaac gtcantgacgtttgcggacgcatgtgcaaagcatactgccgccattttacgccgacaggaactgaatatagattatgcaa tggtgctattcgcgttacatcgcaggcaccgaaactttacggcagaaattacggagaaaacgtcattgatttgtggaagt taccgcttggaggaagttgtcctacattccaaagagaacaagtggcagtcaaatttttctgcgattttaaaagtgattgg ttatggggtacgtcgcaaaatccatacaatggccgaagcaatttaagagatcaattaattatgacggacaataatttagt aagtgacccatttggaatgcgaataaaccaccatgtactgcaggcgataggaaaataa |
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Protein
| Protein ID | pfu_aug2.0_1311.1_04955.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1311.1_04955.t1 MIISAVAILISYFGAGLAFIEEIPLPSDYEQCLDTQYRRTDLTRSVGYHVYWRCKQKSAMRYAMESGTNMTYEEYRYMIS LLPPRNLFFSSGFKDFHHPNAEPRIRKEYRRMTESERNAYHHAINLLKRIPLGKSNRYDVLAAIHQGGAIGVAHEGPNFL GWHRVYLLIYENALRQVVPGVTVPYFAGELDGRMRDSKKSVLFSEKFLGTGRGAVRTGPFRNFKTESGPLVRNIAEDGQL WTDEGLERILNQSSVADITTPNAADENSIERQHDDIHGWLGGGVGQIGELEESSQDPVFFNLHAYVDFIFERFRDRLLLR GKDPADDYPKNFGDERHSPTARMGFGNILNYEGYSNGLASVVHYEPVPTCSKAKPYCGSKYLVCNTRANPCRCESRTTAQ VRRMQSRNKDDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDEDTCETNEAMQNRYRCDQSNDIRKFVFV PVEVISRRPPEKSTYNSYPVFNSKVYTKLGDIYSPKTYGIDDMLPTGKCATYTRCENEYTPSAGKIFVEANGLNYQGQYT DFAVIDTRLALSSSTSYVAVKSPEIGKTEVLLSARDVCGRMCKAYCRHFTPTGTEYRLCNGAIRVTSQAPKLYGRNYGEN VXDVCGRMCKAYCRHFTPTGTEYRLCNGAIRVTSQAPKLYGRNYGENVIDLWKLPLGGSCPTFQREQVAVKFFCDFKSDW LWGTSQNPYNGRSNLRDQLIMTDNNLVSDPFGMRINHHVLQAIGK |
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