Gene
| Gene Model ID | pfu_aug2.0_1311.1_04957 |
|---|---|
| Locus | scaffold1311.1 : 92466 ... 112000 : + |
| To GenomeBrowser | scaffold1311.1:92466..112000 |
| Genes list of scaffold | scaffold1311.1 |
| Synonym | pfu_aug1.0_4665.1_30757 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1311.1_04957.t1 | 7 | 1 | WD40 | 34 | 64 | 3.3e-19 | 67.9 | 0.0047 | 35.0 | 4.5 |
| pfu_aug2.0_1311.1_04957.t1 | 7 | 2 | WD40 | 72 | 107 | 3.3e-19 | 67.9 | 2.1e-09 | 1.6e-05 | 24.6 |
| pfu_aug2.0_1311.1_04957.t1 | 7 | 3 | WD40 | 157 | 167 | 3.3e-19 | 67.9 | 1.2 | 8700.0 | -3.2 |
| pfu_aug2.0_1311.1_04957.t1 | 7 | 4 | WD40 | 204 | 236 | 3.3e-19 | 67.9 | 9.1e-11 | 6.8e-07 | 28.9 |
| pfu_aug2.0_1311.1_04957.t1 | 7 | 5 | WD40 | 256 | 282 | 3.3e-19 | 67.9 | 0.47 | 3500.0 | -1.9 |
| pfu_aug2.0_1311.1_04957.t1 | 7 | 6 | WD40 | 311 | 331 | 3.3e-19 | 67.9 | 0.053 | 400.0 | 1.1 |
| pfu_aug2.0_1311.1_04957.t1 | 7 | 7 | WD40 | 345 | 376 | 3.3e-19 | 67.9 | 2.7e-08 | 0.0002 | 21.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1311.1_04957.t1 | gi|676446354|ref|XP_009051052.1| | hypothetical protein LOTGIDRAFT_159161 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1311.1_04957.t1 | gi|524877576|ref|XP_005095487.1| | PREDICTED: WD repeat-containing protein 89-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1311.1_04957.t1 | gi|524877574|ref|XP_005095486.1| | PREDICTED: WD repeat-containing protein 89-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1311.1_04957.t1 | gi|585647751|ref|XP_006814101.1| | PREDICTED: WD repeat-containing protein 89-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1311.1_04957.t1 | gi|115658000|ref|XP_788954.2| | PREDICTED: WD repeat-containing protein 89 isoform X2 [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1311.1_04957.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1311.1_04957.t1 atggcagaagatgagcaaggtgagatgggactgagtgatgtactgaggaacctcagcttacacgagaagtctgcaatctc cataaagaaggttgaggatgactatgttctagatatagctgtacaaccaggattagaatctgatcgatgtatagcagcta ctagcagcgactacagtctccgtctttacaaacaaggtaccttggctaacatcggcagtctgacgggacacagtaatgtg gtgacaggcgtcactttctccagtactgacaaaaacactctatattcttcatcactggactcttgtataaaatgttggga tttaagaacatcaaaatgtacacaacagcttgaaggaccatgtaaacttcgttgtgagttcagtagcctgggagcaaaca gtaatgactttattgtatgtgctggtacggaaaaatcaaagaaagatgaagatgtgcacatcttattctgggcagatttt acgccttatcttatcagctcctttgaaagtttgaacgatagttacgatacattttaccagaaatttatcttcattactca ttctcttcatagggacagaaggaaaggggaatttcttgggtcttattgtgaaagtcatgaagatgatataactcaggtat gtttccacccatcagatcctaacaagttggccactggatccaccgatggtttggtctgcatgtttgatatttcacaagat agcgaggatgatgccatattgttcacttttaattcagattcatctgtgagtaaagttggctggtgtggatcagaggcatc aaatctgtattgtacaactcacattgacaccttacacgtgtgggactcagatcagggagatgatattttagaaataagag atgccaaggaaaggctagagaacaagctatcaattgattatgttgttgactgtttctacgatgatcagctctacttggtg gccggaactcatagtggagatattaaaatttttgaagccactgaagatttaaattctgttgctacgttacaaggtggcca cacagcaactgtccgatgttcctactgggataaaacaacaaaagcattgatatccggtggagaggactccctcctgtgtt tgtggtcctcagaatcatcggccaaccgcaaaggaaacaatgcaaaggtaaccttatga |
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Protein
| Protein ID | pfu_aug2.0_1311.1_04957.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1311.1_04957.t1 MAEDEQGEMGLSDVLRNLSLHEKSAISIKKVEDDYVLDIAVQPGLESDRCIAATSSDYSLRLYKQGTLANIGSLTGHSNV VTGVTFSSTDKNTLYSSSLDSCIKCWDLRTSKCTQQLEGPCKLRCEFSSLGANSNDFIVCAGTEKSKKDEDVHILFWADF TPYLISSFESLNDSYDTFYQKFIFITHSLHRDRRKGEFLGSYCESHEDDITQVCFHPSDPNKLATGSTDGLVCMFDISQD SEDDAILFTFNSDSSVSKVGWCGSEASNLYCTTHIDTLHVWDSDQGDDILEIRDAKERLENKLSIDYVVDCFYDDQLYLV AGTHSGDIKIFEATEDLNSVATLQGGHTATVRCSYWDKTTKALISGGEDSLLCLWSSESSANRKGNNAKVTL |
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