Gene
| Gene Model ID | pfu_aug2.0_1313.1_11584 |
|---|---|
| Locus | scaffold1313.1 : 10138 ... 12055 : - |
| To GenomeBrowser | scaffold1313.1:10138..12055 |
| Genes list of scaffold | scaffold1313.1 |
| Synonym | pfu_aug1.0_2937.1_08493 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1313.1_11584.t1 | 4 | 1 | zf-B_box | 17 | 59 | 2.4e-07 | 30.5 | 5.7e-10 | 1.7e-06 | 27.8 |
| pfu_aug2.0_1313.1_11584.t1 | 4 | 2 | zf-B_box | 73 | 109 | 2.4e-07 | 30.5 | 1.5e-05 | 0.045 | 13.6 |
| pfu_aug2.0_1313.1_11584.t1 | 4 | 3 | zf-B_box | 360 | 368 | 2.4e-07 | 30.5 | 1.3 | 4000.0 | -2.2 |
| pfu_aug2.0_1313.1_11584.t1 | 4 | 4 | zf-B_box | 484 | 490 | 2.4e-07 | 30.5 | 3.5 | 10000.0 | -3.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1313.1_11584.t1 | gi|642923646|ref|XP_008193588.1| | PREDICTED: tripartite motif-containing protein 45, partial [Tribolium castaneum] | 2.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_1313.1_11584.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1313.1_11584.t1 atggcgtttgcttcgtcaagaatagaggcgcaggaggctataataaaaccctgtgatttatgtgaagatgaagaaaatgt gaactggttctgtaaggactgtgatcaaaatctatgtgatagatgtaaaaagacacatcttcgcagtaatgtctcaaagt ctcatgctgtactttcgatttcggaaggttttgaaatgggaaaaaagaatatatcaaacatgtgtctggatcatgacgaa ccgtgtttattcttatgtagaacatgttgtaagaacattttccctacatgtttatctatggagcacaaggtacatgattt tgtggaaatgcgcaagcttcactgtgaaatgcagaaaccattggaccttgttatcaaaacaaaggaagacgaaataaaga aaatgaggaaacattacgaggacttggatcagcatgcaaacgaatctgaaagttatctgaaagaacgatatgacttcatt gacgaccgaattaaagctataaagctagccgctgacgatgaaggtcagatactaaaggagttcctccaaaaacagatgag gcagagggataaagaagtcaaaatggtccaaaatgaaatccaaatccataccaatgtctatgagaaagaaatcgaaacaa tccagcgtgaacttcgtctccagacaggctcatcattgaaaggttttgtaaaggagtctattacaaaacttgagtcattg cgatcgatttccatagaagttccaaatacgagtcagttatttactgagggacattttgatcaaacaaaaatcagagatat gattggagaaatgagtacgacagtaaaagtggaaaagaaaaaagataatgaagaagcaaactgcgacgccttttcagacc tggaaattatcagttcatttgagcttaaagatattcgttattgtaacggtatgtgcctcagtcccgatggaagtatttta gtcattggtaatagaattgttactaaaataagttccgattgctctaatattcttgataggatacgacttgtaaatttcgg aagtgctctaaacgtactgtcgggtctgtttcaatccgtcagttgcgtagcatgttcacagtctggtgatgttatcattg tgtatagtagacatgtgtacatgtttaattctgatggtgtgagaaatgagttaacgaacctatatccaaacgatgcatac gacatagttgtgactagccaaggacatattgctttgaatgttgatcatgaatacatagcaattttttcaagtgaaggggt gaaattagcacaagtcagagtagaggagggaatcagcacgttttgcacagatagagatgataatttcattattgcacatc cgaatgccgtacaccttacgctactggatggaaagactacactagtcaaaacaaaatgggctgtctcaacatccggcatc atgttgctaacatgtgaccggcatgggaatatactggcatcaaacaaaaggaagcatatttactttttcggcaagaacgg aggggtgaaggaaactttcactttggactgtgatgaaatcagagggatctgtgtgaatcaggacgatcggttgttggttc tcatgattcgaaattacgaagcgaaaatacttgcaataaaatatttgaaatag |
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Protein
| Protein ID | pfu_aug2.0_1313.1_11584.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1313.1_11584.t1 MAFASSRIEAQEAIIKPCDLCEDEENVNWFCKDCDQNLCDRCKKTHLRSNVSKSHAVLSISEGFEMGKKNISNMCLDHDE PCLFLCRTCCKNIFPTCLSMEHKVHDFVEMRKLHCEMQKPLDLVIKTKEDEIKKMRKHYEDLDQHANESESYLKERYDFI DDRIKAIKLAADDEGQILKEFLQKQMRQRDKEVKMVQNEIQIHTNVYEKEIETIQRELRLQTGSSLKGFVKESITKLESL RSISIEVPNTSQLFTEGHFDQTKIRDMIGEMSTTVKVEKKKDNEEANCDAFSDLEIISSFELKDIRYCNGMCLSPDGSIL VIGNRIVTKISSDCSNILDRIRLVNFGSALNVLSGLFQSVSCVACSQSGDVIIVYSRHVYMFNSDGVRNELTNLYPNDAY DIVVTSQGHIALNVDHEYIAIFSSEGVKLAQVRVEEGISTFCTDRDDNFIIAHPNAVHLTLLDGKTTLVKTKWAVSTSGI MLLTCDRHGNILASNKRKHIYFFGKNGGVKETFTLDCDEIRGICVNQDDRLLVLMIRNYEAKILAIKYLK |
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