Gene
| Gene Model ID | pfu_aug2.0_1313.1_11585 |
|---|---|
| Locus | scaffold1313.1 : 23066 ... 25895 : - |
| To GenomeBrowser | scaffold1313.1:23066..25895 |
| Genes list of scaffold | scaffold1313.1 |
| Synonym | pfu_aug1.0_27785.1_33642 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1313.1_11585.t1 | 2 | 1 | zf-B_box | 17 | 60 | 2.2e-14 | 53.0 | 1.4e-08 | 5.0e-05 | 23.0 |
| pfu_aug2.0_1313.1_11585.t1 | 2 | 2 | zf-B_box | 74 | 109 | 2.2e-14 | 53.0 | 2.7e-12 | 1.0e-08 | 34.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1313.1_11585.t1 | gi|156384113|ref|XP_001633176.1| | predicted protein [Nematostella vectensis] | 9.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_1313.1_11585.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1313.1_11585.t1 atggcgtttgcttcaacaatgataggggcacaggaggccatcataaaatcgtgtgatatttgcgaagaaggtgaaaacgt caattggtattgtgtcgactgcgcccagaatctatgtgacggatgtgaaaaaggacataagaaaatcgctacatgtaaaa atcaccagattgtctccatttcggagggtatttccattacaaagaggaacgtctcaagtctatgcaaggaacatagtgaa ggattttcattcttctgccgatcatgtgagaaaaacatttgctcaaagtgtctctctgctagccataagtcacataattt cgtagaacttcgggattatcaatcagaattacaggatagactggaagccattttgaaggaaaaggaaggagaaaaggaac ttataacacaaagcataaatgcttctatcggacatgagaaaaaatgtgaagaaacattaactcaaaactacaccgccatt gacgacatggtgagatcaatccaaatagccgccaccgaggaggggtcaaagatgaaactctctctaaaatcaggcatcga tgggagactgacagaggcaaaagaaaacagacaaaaaatgcaagcacaaaagaacctttacgacaaagagatccaagctg ttcaacaagagttaagaatacagactcctccaacgtttaaccagtttttcaaagcgtcaacctacaagctacaatccctc aaacctttggtattcccgttgccagtaatcaacacgtttaccgcaggacatatgcaaaaagagcttatccgggatatgat cggtaaagatggagaagaagtccatgcagaagcaccacctcaggaaatgctaacaaggagcttccgggccattaatcaaa atctggaaacagtcaacactttcaacaaactggattctgcaaagaattgttatagtatatgcatcagctctgaaggttat atttggcttggcgggaagggatgcgtctacaagatgagctcagactgctccaagacgaatcatcagataccagcccggga atcccgactatcctgtgattacataacatgtttacagtcaggggatgctgtggtgtcatatggatatgggtcacacttcc tggacagattcaccactgatgggaagagagtagaattcacagacttatctccacgtcatggctacgatatagccaaaaca tacgatgacgaagtggtggttagtgcatgtactgactaccttggtttgctctcagatctgaattcatggtccttaatcat atgctcaaaggaagggaaaaagctgaaggacatcaaaatgggagaaaatatcggaaactttggcatcgatgtatatggta acattatcaaatctgctgaagcttcgctttcgttaacaattctagacagaaggggaaccgttctgaagactgtcccaaca aagaaaccaaatctacagagaatctcatgtgacagtcatggaaacattgtaggtgtctcaggaggagggaaagaggtccg tgtaatcagtgatgatggaaaagaagaaagatgctttactgtaaagtgtcggaatggtatcaatgacatctgtattgaca gtgaaaatcgtctgctaatactaatggacaaaaagagagtcgtcgtcggaaaatacctgtaa |
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Protein
| Protein ID | pfu_aug2.0_1313.1_11585.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1313.1_11585.t1 MAFASTMIGAQEAIIKSCDICEEGENVNWYCVDCAQNLCDGCEKGHKKIATCKNHQIVSISEGISITKRNVSSLCKEHSE GFSFFCRSCEKNICSKCLSASHKSHNFVELRDYQSELQDRLEAILKEKEGEKELITQSINASIGHEKKCEETLTQNYTAI DDMVRSIQIAATEEGSKMKLSLKSGIDGRLTEAKENRQKMQAQKNLYDKEIQAVQQELRIQTPPTFNQFFKASTYKLQSL KPLVFPLPVINTFTAGHMQKELIRDMIGKDGEEVHAEAPPQEMLTRSFRAINQNLETVNTFNKLDSAKNCYSICISSEGY IWLGGKGCVYKMSSDCSKTNHQIPARESRLSCDYITCLQSGDAVVSYGYGSHFLDRFTTDGKRVEFTDLSPRHGYDIAKT YDDEVVVSACTDYLGLLSDLNSWSLIICSKEGKKLKDIKMGENIGNFGIDVYGNIIKSAEASLSLTILDRRGTVLKTVPT KKPNLQRISCDSHGNIVGVSGGGKEVRVISDDGKEERCFTVKCRNGINDICIDSENRLLILMDKKRVVVGKYL |
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