Gene
| Gene Model ID | pfu_aug2.0_1313.1_11587 |
|---|---|
| Locus | scaffold1313.1 : 46976 ... 55718 : + |
| To GenomeBrowser | scaffold1313.1:46976..55718 |
| Genes list of scaffold | scaffold1313.1 |
| Synonym | pfu_aug1.0_13284.1_32308 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1313.1_11587.t2 | 4 | 1 | SHIPPO-rpt | 4 | 34 | 2.4e-21 | 75.4 | 4.2e-11 | 6.2e-07 | 29.9 |
| pfu_aug2.0_1313.1_11587.t2 | 4 | 2 | SHIPPO-rpt | 40 | 73 | 2.4e-21 | 75.4 | 0.00028 | 4.1 | 8.4 |
| pfu_aug2.0_1313.1_11587.t2 | 4 | 3 | SHIPPO-rpt | 84 | 112 | 2.4e-21 | 75.4 | 5.3e-09 | 7.9e-05 | 23.3 |
| pfu_aug2.0_1313.1_11587.t2 | 4 | 4 | SHIPPO-rpt | 121 | 148 | 2.4e-21 | 75.4 | 2.4e-09 | 3.6e-05 | 24.4 |
Transcript
| Transcript ID | pfu_aug2.0_1313.1_11587.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1313.1_11587.t1 atgttcaaaacgcccggaccaggcgcctacagcccagaggatgttgggcaaacagcccacttcagacaccctgcctacag cttcggtactcgccacagacacaggaaaacggataatactccagctcctaacaactatacattaacacaaatgttgggta aaaccacagacagtggtaagcctcaggctcccatcttctccttgtcaggaaggcaaaagcagggtggtttccatgaggat ttagccaagaccccaggacctggaacttacaacactaccgagcctaatctatacagagacaaagctcccctgtacagtat gacgagcagaaacgttatgccaggagataccacgcgtaaaccaggacctggagctcactcaccagaaaacgtatacatca caaagaggcagggtccaaaatttagttttggaatccgtcactctcaatacacagccccgttaatcgtagacgtcgttgac gactatgtaccttctcagtcttattgtaaatcttaa |
|
| Transcript ID | pfu_aug2.0_1313.1_11587.t2 |
| Definition | - |
>pfu_aug2.0_1313.1_11587.t2 atgttcaaaacgcccggaccaggcgcctacagcccagaggatgttgggcaaacagcccacttcagacaccctgcctacag cttcggtactcgccacagacacaggaaaacggataatactccagctcctaacaactatacattaacacaaatgttgggta aaaccacagacagtggtaagcctcaggctcccatcttctccttgtcaggaaggcaaaagcagggtggtttccatgaggat ttagccaagaccccaggacctggaacttacaacactaccgagcctaatctatacagagacaaagctcccctgtacagtat gacgagcagaaacgttatgccaggagataccacgcgtaaaccaggacctggagctcactcaccagaaaacgtctggatgc ataaacgaaagaagcctgaatattccttcggaatccgtcacagtcaatatctggctccactcatcgtggaagttaacgat taa |
|
Protein
| Protein ID | pfu_aug2.0_1313.1_11587.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1313.1_11587.t1 MFKTPGPGAYSPEDVGQTAHFRHPAYSFGTRHRHRKTDNTPAPNNYTLTQMLGKTTDSGKPQAPIFSLSGRQKQGGFHED LAKTPGPGTYNTTEPNLYRDKAPLYSMTSRNVMPGDTTRKPGPGAHSPENVYITKRQGPKFSFGIRHSQYTAPLIVDVVD DYVPSQSYCKS |
|
| Protein ID | pfu_aug2.0_1313.1_11587.t2 |
| Definition | - |
>pfu_aug2.0_1313.1_11587.t2 MFKTPGPGAYSPEDVGQTAHFRHPAYSFGTRHRHRKTDNTPAPNNYTLTQMLGKTTDSGKPQAPIFSLSGRQKQGGFHED LAKTPGPGTYNTTEPNLYRDKAPLYSMTSRNVMPGDTTRKPGPGAHSPENVWMHKRKKPEYSFGIRHSQYLAPLIVEVND |
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