Gene
| Gene Model ID | pfu_aug2.0_1314.1_14951 |
|---|---|
| Locus | scaffold1314.1 : 1541 ... 15985 : - |
| To GenomeBrowser | scaffold1314.1:1541..15985 |
| Genes list of scaffold | scaffold1314.1 |
| Synonym | pfu_aug1.0_3356.1_16098 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1314.1_14951.t1 | 13 | 1 | SRCR | 31 | 140 | 0.0 | 729.9 | 1.9e-22 | 3.9e-19 | 68.8 |
| pfu_aug2.0_1314.1_14951.t1 | 12 | 1 | SRCR_2 | 35 | 68 | 1.90001e-40 | 137.0 | 0.013 | 29.0 | 5.0 |
| pfu_aug2.0_1314.1_14951.t1 | 13 | 2 | SRCR | 148 | 244 | 0.0 | 729.9 | 1.7e-20 | 3.6e-17 | 62.5 |
| pfu_aug2.0_1314.1_14951.t1 | 12 | 2 | SRCR_2 | 157 | 245 | 1.90001e-40 | 137.0 | 1.1e-08 | 2.3e-05 | 24.5 |
| pfu_aug2.0_1314.1_14951.t1 | 13 | 3 | SRCR | 264 | 345 | 0.0 | 729.9 | 1.0e-18 | 2.1e-15 | 56.8 |
| pfu_aug2.0_1314.1_14951.t1 | 12 | 3 | SRCR_2 | 274 | 305 | 1.90001e-40 | 137.0 | 2.0e-08 | 4.1e-05 | 23.7 |
| pfu_aug2.0_1314.1_14951.t1 | 13 | 4 | SRCR | 374 | 463 | 0.0 | 729.9 | 1.6e-20 | 3.4e-17 | 62.6 |
| pfu_aug2.0_1314.1_14951.t1 | 12 | 4 | SRCR_2 | 385 | 463 | 1.90001e-40 | 137.0 | 0.00011 | 0.23 | 11.7 |
| pfu_aug2.0_1314.1_14951.t1 | 13 | 5 | SRCR | 475 | 567 | 0.0 | 729.9 | 9.3e-20 | 2.0e-16 | 60.1 |
| pfu_aug2.0_1314.1_14951.t1 | 12 | 5 | SRCR_2 | 484 | 517 | 1.90001e-40 | 137.0 | 6.0e-07 | 0.0013 | 18.9 |
| pfu_aug2.0_1314.1_14951.t1 | 13 | 6 | SRCR | 583 | 678 | 0.0 | 729.9 | 6.9e-24 | 1.5e-20 | 73.3 |
| pfu_aug2.0_1314.1_14951.t1 | 12 | 6 | SRCR_2 | 603 | 624 | 1.90001e-40 | 137.0 | 3.0e-06 | 0.0064 | 16.7 |
| pfu_aug2.0_1314.1_14951.t1 | 13 | 7 | SRCR | 690 | 773 | 0.0 | 729.9 | 1.8e-18 | 3.9e-15 | 56.0 |
| pfu_aug2.0_1314.1_14951.t1 | 12 | 7 | SRCR_2 | 700 | 746 | 1.90001e-40 | 137.0 | 4.8e-06 | 0.01 | 16.0 |
| pfu_aug2.0_1314.1_14951.t1 | 13 | 8 | SRCR | 806 | 900 | 0.0 | 729.9 | 2.0e-13 | 4.2e-10 | 39.8 |
| pfu_aug2.0_1314.1_14951.t1 | 13 | 9 | SRCR | 903 | 987 | 0.0 | 729.9 | 3.1e-16 | 6.6e-13 | 48.8 |
| pfu_aug2.0_1314.1_14951.t1 | 12 | 8 | SRCR_2 | 904 | 926 | 1.90001e-40 | 137.0 | 0.2 | 410.0 | 1.2 |
| pfu_aug2.0_1314.1_14951.t1 | 13 | 10 | SRCR | 996 | 1088 | 0.0 | 729.9 | 1.2e-17 | 2.5e-14 | 53.4 |
| pfu_aug2.0_1314.1_14951.t1 | 12 | 9 | SRCR_2 | 1005 | 1036 | 1.90001e-40 | 137.0 | 1.7e-05 | 0.037 | 14.2 |
| pfu_aug2.0_1314.1_14951.t1 | 13 | 11 | SRCR | 1111 | 1181 | 0.0 | 729.9 | 3.1e-14 | 6.6e-11 | 42.4 |
| pfu_aug2.0_1314.1_14951.t1 | 12 | 10 | SRCR_2 | 1115 | 1125 | 1.90001e-40 | 137.0 | 0.68 | 1400.0 | -0.5 |
| pfu_aug2.0_1314.1_14951.t1 | 13 | 12 | SRCR | 1196 | 1297 | 0.0 | 729.9 | 1.2e-20 | 2.6e-17 | 62.9 |
| pfu_aug2.0_1314.1_14951.t1 | 12 | 11 | SRCR_2 | 1202 | 1234 | 1.90001e-40 | 137.0 | 0.007 | 15.0 | 5.9 |
| pfu_aug2.0_1314.1_14951.t1 | 13 | 13 | SRCR | 1316 | 1407 | 0.0 | 729.9 | 1.1e-28 | 2.3e-25 | 88.8 |
| pfu_aug2.0_1314.1_14951.t1 | 12 | 12 | SRCR_2 | 1320 | 1358 | 1.90001e-40 | 137.0 | 1.2e-07 | 0.00025 | 21.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1314.1_14951.t1 | gi|697483353|ref|XP_009673252.1| | PREDICTED: deleted in malignant brain tumors 1 protein-like isoform X1 [Struthio camelus australis] | 0.0 |
| pfu_aug2.0_1314.1_14951.t1 | gi|390370105|ref|XP_001199982.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1314.1_14951.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1314.1_14951.t1 atgttagtagtgtttcatatatcatcagacatacctatacgactcaccaatggtaccagtttgagggacggcaatcgacg atttgctaacacttccggtcgtgtggaggtgtctattaacaaccagtggggtacaatatgtggtacgtcatactgggatg acgaggacgctacagtgctgtgtagaatgctgaatcacacaagtgggcgagctctcagatatggtcagtttggtgctgga agcggtccaatttggatagcttacttacgttgtcaaggagatgaggactccattttccactgtccaatggcatttaatga gcagagatcatcgtccagtggaatgttcctgccacatcgttccagtcctgtacagagacatggctgttcttcacataatt cggatgctggtgttcagtgttatgactcagttcgccttgttgactccaaggatattttctatgggcgtcttgaaatgtat attaacaaaacattcaccagcgtatgtgatgatggttttactgctgcgtcagccaaggtagtatgtaacatcctggggta tccatatggacataaacagtgttgctcagctctcggcaagttcccgtcggagaatataacggttacaaatgtacgatgta gaggacacgagaggagtttagatcaatgttcccatgattcaaccctgacaaggccgtgtaaaagtgggaaatatgtgtct gtatactgttcaagacagagaatcgttgaaagtgcacaagagataaccgtgagaattagagaagacaagtattatggatc gttggaggccaataagtacgggttctggagtcctgtctgcaatgaaagatgggatgaccatgacgctaacgtcacttgtc gacagcttggttactttggtgggatggcgtttaaaggttcatccaggttgcaagctcctatgacagtgggtgggtttaac tgtacagggctggaaggaagcctcagagaatgtaaacataacaactttggggaggatatgggctgctcagagaaaattgt tggcagatttactcgcaccacggcaggggtgctgtgttaccagggtaacgagggtttgaagtttagaatcagtggaggac gtaagagtggtagagtggaggtattttactacggtatgtgggggcgtgtctgcaacagacgatgggatgacaaggacgcc agagtgttctgtagatcactaggaaaaggatttattgatggtgaggcaggaccagaggaaaactctgatgaggataagtc cagtgttgtgtgggtagattatgtagactgtgagggcacagaggaaggactgctacaatgtgatttacactgggaccctg actacagctcatgcagctctgctacagctatatctaaatgtatggactcagttcgattagaaaagggagacaaaaagagt catggtgttgtacaagtttatcaacatgagaattggggtactgtgtgtaaccatctatggacagaggaggatatacgtgt tacatgccgacagctagggtatgagagaggcgtgtctgtttgctgtggagcctatgggtacttgtatgccaagggtgtta ttgataaagtcagttgctatggaaacgagacaagtctgttgaactgcacgtatcatccaccacctggttcttgttcacaa gattacgcagctgttgcttgttttaatgggtcaatgccaacatacagagactatggaatttccatctccggctccagtaa cacgtcgggtgctgtagagttgacgttccttaacatatctggtcgagtatgtgctgatggctgggacaatgccgatgcca ctgtggcatgtagagagatgggctacatgaaagggttggcatataaccacaagatactgtttggtaaaggatcaccgata tgggcaacaaatgtaaactgtactggcaatgagtataccctatcccagtgtcctaactttacactgggtaatgtcaagga ttgtaggcagagatttgatgccggagtggtatgctattcaactgtcggtgtcaatttccgactgtctggaccgacatctt actatggtcgtgtcgacatggccgttgacggagtatggggtgctatatgtaacagatactgggacaatgctgaagcctcc gctttctgtaggtctataggatttaatacaggcttcccatatcacaaaaagagtgatctgaaatctactgatgctaactt tactatatatgaacccaatgttcactgtaaagggaaggagacgtcattgttagactgcccacacgagggatggaaggagg cattctcctcatcttatatgggacaggtggatctaatgtctggagggtacaaacttggctttgtcgttgacgacaataaa gaaaatgtaatgagtcagactctcaccaagggacaaatagccgtgcagcagtatggcattgtgggaaggatttctagtca gttctgggatgacactgaggcccaggtcttctgtcgctcacgtggagccaagtatggcatttcctatcaaatggcaccaa agccattcaggtcagatcctacctatttgatgagtgacttcaactgcactgggtcagaaccttctctccttaattgttct tatcatggacgtaaaaatctaggaaataataccatggtaaacacagcagctgccctctgctataatgaatcagtatgtga tctgtcatgggatgatcaggatgcagcggtgttctgtcgtatgatgaatttctctgacggctatgccgtatcgggtggac attttggggagggcacaggtcctgtatggataagtcatcttgtatgtaaaggaacggagaattctatacactcttgtgct catcaaggattcagtgaagaaaatgtcaccacagggtggaagaaatgctcatcacataaagacgatgctggtgtacattg tgttgataaattgaggttaaatcttggttacaatgcatcaatgggagcagtggagttgtatcacaatagaaaatggactg ctgtatgtgagagtggtactaataatcttggtgctagagttatatgtagaacactaggttacaatgatggtagagcagtg ccaggttctgcgtttgggaacataacgagccctatacaagtgttacgtatagactgtagcggtaacgaggatgacgtatc caggtgtaggatagactacacagagcctggtgaatgtacaaagtacctgtctgtatactgtagtaataaagccattatac aaaaaagatttgacgtaaaactgaacttggatgatgacaattccgatggacatgaggtcgaggcatcagtaacttgccga cagcttggatataaaggaggtgtgccatacctcataccagccaacaagaagtacaaacaccccatgctgatgagtcgggt acagtgtctaggtaacgagaccagcctagaaaactgtgcgtatctgagaagggatgagaaaggcagctgtaactatgaag ataagagagcaggagttctgtgttacaagaattcaggtatacagtaccagttttaccctaactccacatataacagaggc cgtgtggagatacagtatgagggtacatggggaggagtgtgtgatttcctctgggattctcgtgatgccgaagttttctg tagaagccagggatttaaaggagggatagagatagctggaggacagtttggacagagttctggtcctttatggttcacca gagtgtcttgtgatggtaacgagccagacatattgaggtgcagccattcaggattcaataactcagggaatattgcctcg acatatgaacgattgtgtaagaagaggtcgaatgatgcagcagcatggtgctttaacgaaactgttgagatacagtccat tcgtcttgctgatggagacggaacattcggacgagttgaggtttttttggctggaccaaatgaatggggaaccatctgtg acgactattgggatgatagggatgccactgtagtatgccggcaacttggatttgccaccggcattgccaaaaaacaaggc agctttggtcgtggttcaggtcccatctggttggacaatatggattgctcaggtaaagaggacagaatccaggaatgtaa gcataatggattcaacatccagaactgtcaccatggtgaagattcaggagttgtgtgtaaaggtgaagcagactcggtaa aatcaagcccggtcaggtcattacagaaagaagaaaatctagctgtggctataactgtaccgataattgttatattaatt gtaataattatagtaataggcgtgtgttactggcgacaaagagagggtggggatagtatgaaaacaacgctagtagacaa tgaaattcacgacccgtcggtgatgccatcaggttctaccgctggacatagctcgtcagacgctggagggagagttacat tgtcacggcttaaagctacgttttcaaaagctataggaacaggaagtgactcaaaacctaaaggacttagtaatccaaat tatgaaaatatgagaaatgaagattttcagctgggacccccatcgggagagtccaacatgtag |
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Protein
| Protein ID | pfu_aug2.0_1314.1_14951.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1314.1_14951.t1 MLVVFHISSDIPIRLTNGTSLRDGNRRFANTSGRVEVSINNQWGTICGTSYWDDEDATVLCRMLNHTSGRALRYGQFGAG SGPIWIAYLRCQGDEDSIFHCPMAFNEQRSSSSGMFLPHRSSPVQRHGCSSHNSDAGVQCYDSVRLVDSKDIFYGRLEMY INKTFTSVCDDGFTAASAKVVCNILGYPYGHKQCCSALGKFPSENITVTNVRCRGHERSLDQCSHDSTLTRPCKSGKYVS VYCSRQRIVESAQEITVRIREDKYYGSLEANKYGFWSPVCNERWDDHDANVTCRQLGYFGGMAFKGSSRLQAPMTVGGFN CTGLEGSLRECKHNNFGEDMGCSEKIVGRFTRTTAGVLCYQGNEGLKFRISGGRKSGRVEVFYYGMWGRVCNRRWDDKDA RVFCRSLGKGFIDGEAGPEENSDEDKSSVVWVDYVDCEGTEEGLLQCDLHWDPDYSSCSSATAISKCMDSVRLEKGDKKS HGVVQVYQHENWGTVCNHLWTEEDIRVTCRQLGYERGVSVCCGAYGYLYAKGVIDKVSCYGNETSLLNCTYHPPPGSCSQ DYAAVACFNGSMPTYRDYGISISGSSNTSGAVELTFLNISGRVCADGWDNADATVACREMGYMKGLAYNHKILFGKGSPI WATNVNCTGNEYTLSQCPNFTLGNVKDCRQRFDAGVVCYSTVGVNFRLSGPTSYYGRVDMAVDGVWGAICNRYWDNAEAS AFCRSIGFNTGFPYHKKSDLKSTDANFTIYEPNVHCKGKETSLLDCPHEGWKEAFSSSYMGQVDLMSGGYKLGFVVDDNK ENVMSQTLTKGQIAVQQYGIVGRISSQFWDDTEAQVFCRSRGAKYGISYQMAPKPFRSDPTYLMSDFNCTGSEPSLLNCS YHGRKNLGNNTMVNTAAALCYNESVCDLSWDDQDAAVFCRMMNFSDGYAVSGGHFGEGTGPVWISHLVCKGTENSIHSCA HQGFSEENVTTGWKKCSSHKDDAGVHCVDKLRLNLGYNASMGAVELYHNRKWTAVCESGTNNLGARVICRTLGYNDGRAV PGSAFGNITSPIQVLRIDCSGNEDDVSRCRIDYTEPGECTKYLSVYCSNKAIIQKRFDVKLNLDDDNSDGHEVEASVTCR QLGYKGGVPYLIPANKKYKHPMLMSRVQCLGNETSLENCAYLRRDEKGSCNYEDKRAGVLCYKNSGIQYQFYPNSTYNRG RVEIQYEGTWGGVCDFLWDSRDAEVFCRSQGFKGGIEIAGGQFGQSSGPLWFTRVSCDGNEPDILRCSHSGFNNSGNIAS TYERLCKKRSNDAAAWCFNETVEIQSIRLADGDGTFGRVEVFLAGPNEWGTICDDYWDDRDATVVCRQLGFATGIAKKQG SFGRGSGPIWLDNMDCSGKEDRIQECKHNGFNIQNCHHGEDSGVVCKGEADSVKSSPVRSLQKEENLAVAITVPIIVILI VIIIVIGVCYWRQREGGDSMKTTLVDNEIHDPSVMPSGSTAGHSSSDAGGRVTLSRLKATFSKAIGTGSDSKPKGLSNPN YENMRNEDFQLGPPSGESNM |
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