Gene
| Gene Model ID | pfu_aug2.0_1314.1_14953 |
|---|---|
| Locus | scaffold1314.1 : 46631 ... 60295 : - |
| To GenomeBrowser | scaffold1314.1:46631..60295 |
| Genes list of scaffold | scaffold1314.1 |
| Synonym | pfu_aug1.0_654.1_07618 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1314.1_14953.t1 | 3 | 1 | Arrestin_N | 7 | 155 | 3.3e-38 | 130.8 | 6.2e-40 | 3.0e-36 | 124.4 |
| pfu_aug2.0_1314.1_14953.t1 | 4 | 1 | Arrestin_C | 10 | 135 | 3.0e-16 | 59.7 | 0.00018 | 0.88 | 9.6 |
| pfu_aug2.0_1314.1_14953.t1 | 4 | 2 | Arrestin_C | 178 | 195 | 3.0e-16 | 59.7 | 0.054 | 270.0 | 1.6 |
| pfu_aug2.0_1314.1_14953.t1 | 4 | 3 | Arrestin_C | 200 | 237 | 3.0e-16 | 59.7 | 6.1e-05 | 0.3 | 11.1 |
| pfu_aug2.0_1314.1_14953.t1 | 3 | 2 | Arrestin_N | 212 | 237 | 3.3e-38 | 130.8 | 0.17 | 860.0 | -0.4 |
| pfu_aug2.0_1314.1_14953.t1 | 4 | 4 | Arrestin_C | 255 | 312 | 3.0e-16 | 59.7 | 1.2e-11 | 5.9e-08 | 32.9 |
| pfu_aug2.0_1314.1_14953.t1 | 3 | 3 | Arrestin_N | 268 | 299 | 3.3e-38 | 130.8 | 0.015 | 73.0 | 3.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1314.1_14953.t1 | gi|524908088|ref|XP_005109151.1| | PREDICTED: arrestin domain-containing protein 3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1314.1_14953.t1 | gi|676479404|ref|XP_009061737.1| | hypothetical protein LOTGIDRAFT_127658 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1314.1_14953.t1 | gi|675849964|ref|XP_009010542.1| | hypothetical protein HELRODRAFT_91458 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_1314.1_14953.t1 | gi|260822042|ref|XP_002606412.1| | hypothetical protein BRAFLDRAFT_118530 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1314.1_14953.t1 | gi|390355261|ref|XP_796522.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1314.1_14953.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1314.1_14953.t1 atgggtaaattgaaatgtttcgaaattattctcacggacaacaagtccgtattccatccaggggaaaaggtgtgtgggaa agtggtggttgaactgaaaggagacatgaaaatgcgttctcttcgagtctttatgagaggtgttgccaaagttcattgga cggaatcacgcagcacgggaagtagactgggctcctatacagagcattacaatgcagaggtggaatacttcttcaagcga caagtattatttggtggagaggtgtgtgaaggaagagacacgttaacagaaggttaccatgagtttcgattctcttttga gctacctatgggtggtatatctacatcgtttgaggggaagcatggcagtgttcgatactggatgaaggcagagatggaca aaccatggtcatttaatcataaaactaaaaaagcttttactgttatcagtcccatcgatataaataagcaggagtaccag gtgtgtgtagagggcagcactgagaagaccttgtgttgttggctatgtacatcagggccgatatctattatagcacgtac agacaggagaggatattgtccaggtttaccagtgattgcagggaccagagggaactgggagtcacagctccttaaaatac cagctgtttcaccatccattatcaactgctgtgtcatgaaagtagagtattatgttaagacctttcttttgttaccaaga tttgacatattactacgttattctaccataggtttaccagtgattgcagggaccagagggaactgggagtcacagctcct taaaataccagctgtttcaccatccattatcaactgctgtgtcatgaaagtagagtattatgttaaggtagccctccata tacctggatcatacaatctcactttacatctacctgtggtcataggtaccgtgccatacagaaggggaacttttcgattt acagagtctcatttcttcagagaaactcaaccacagtttgagagcatgagttgtctccctctgccgccaccatacagaga aactattacaccccctccaccatttgaagatcctcctacgtatcatgagagtgtgggtggggcagtcagtatagtagatg aggaggatggagatgacccggacttcaacatgggggacctgacctacacacccatgtatacatatgtgtataattataga cccccacctgcttatgctgaggtttccacttcctctgtctgtctgttagtccagcattcctttcgttttgatactctaga attcctagactgtcctctgtcaccatttcttgttttattgatgctgtggtgctccatttaa |
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Protein
| Protein ID | pfu_aug2.0_1314.1_14953.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1314.1_14953.t1 MGKLKCFEIILTDNKSVFHPGEKVCGKVVVELKGDMKMRSLRVFMRGVAKVHWTESRSTGSRLGSYTEHYNAEVEYFFKR QVLFGGEVCEGRDTLTEGYHEFRFSFELPMGGISTSFEGKHGSVRYWMKAEMDKPWSFNHKTKKAFTVISPIDINKQEYQ VCVEGSTEKTLCCWLCTSGPISIIARTDRRGYCPGLPVIAGTRGNWESQLLKIPAVSPSIINCCVMKVEYYVKTFLLLPR FDILLRYSTIGLPVIAGTRGNWESQLLKIPAVSPSIINCCVMKVEYYVKVALHIPGSYNLTLHLPVVIGTVPYRRGTFRF TESHFFRETQPQFESMSCLPLPPPYRETITPPPPFEDPPTYHESVGGAVSIVDEEDGDDPDFNMGDLTYTPMYTYVYNYR PPPAYAEVSTSSVCLLVQHSFRFDTLEFLDCPLSPFLVLLMLWCSI |
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