Gene
| Gene Model ID | pfu_aug2.0_132.1_06992 |
|---|---|
| Locus | scaffold132.1 : 1576 ... 29284 : + |
| To GenomeBrowser | scaffold132.1:1576..29284 |
| Genes list of scaffold | scaffold132.1 |
| Synonym | pfu_aug1.0_14719.1_03542 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_132.1_06992.t1 | 6 | 1 | WD40 | 14 | 49 | 5.2e-26 | 89.5 | 1.6e-08 | 5.8e-05 | 22.8 |
| pfu_aug2.0_132.1_06992.t1 | 6 | 2 | WD40 | 99 | 135 | 5.2e-26 | 89.5 | 2.1e-10 | 7.7e-07 | 28.7 |
| pfu_aug2.0_132.1_06992.t1 | 6 | 3 | WD40 | 154 | 175 | 5.2e-26 | 89.5 | 0.23 | 860.0 | 0.0 |
| pfu_aug2.0_132.1_06992.t1 | 6 | 4 | WD40 | 198 | 212 | 5.2e-26 | 89.5 | 0.02 | 75.0 | 3.4 |
| pfu_aug2.0_132.1_06992.t1 | 6 | 5 | WD40 | 246 | 267 | 5.2e-26 | 89.5 | 6.0e-06 | 0.022 | 14.6 |
| pfu_aug2.0_132.1_06992.t1 | 6 | 6 | WD40 | 280 | 302 | 5.2e-26 | 89.5 | 2.3e-05 | 0.085 | 12.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_132.1_06992.t1 | gi|676442351|ref|XP_009049779.1| | hypothetical protein LOTGIDRAFT_231033 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_132.1_06992.t1 | gi|524892404|ref|XP_005102730.1| | PREDICTED: WD repeat-containing protein 82-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_132.1_06992.t1 | gi|91084031|ref|XP_966556.1| | PREDICTED: WD repeat-containing protein 82 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_132.1_06992.t1 | gi|665795580|ref|XP_008545543.1| | PREDICTED: WD repeat-containing protein 82 [Microplitis demolitor] | 0.0 |
| pfu_aug2.0_132.1_06992.t1 | gi|755957482|ref|XP_011303768.1| | PREDICTED: WD repeat-containing protein 82 [Fopius arisanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_132.1_06992.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_132.1_06992.t1 atgaaactcacagataatgtagttcgaaattttaaagttgccaagatattccgggaaaatacagacagaataaatagaat agatttctctacatgtggaaataccttaatttcaagcagtgatgacgattctatcgttatctacgattgccaaaatggaa caccaaagaagactttgaatagcaagaaatatggagtggatctcatatgttatacacatgctgtgaatactgctctccat ggatcaactaaagttgatgacaccattcgttatctctctctccatgacaacaagtatatcagatactttccaggccacac aaaaaaagttgtctccctgaacatgtctccgatcaacgattcctttctctctggatcattagacaaaacaattcgactct gggatctgaggtcacaaaactgtcagggcctgatgcatctgccagggcggcctgtagcagcctttgaccctgagggcctt atttttgctgctggtatcaactcagaatgtgttaagctttacgatctgaggtccttcgacagaggaccattcacaacgtt taagctgacacaggataaggactgtgattggacgggtatgaaattcagtcccgatggtaaactgatactcatctccacta acggacaggtgttaaggttgatcgacgccttccaagggacaccactccaaactttcatgggttttcagaacaataaaggt gtggcactagaagcatcatttagtcccgactccagatttgcattctgtggttcaacagatggtagaattcactgttggaa tacagagaccggagttaaagtagcagtcatgaattgtgaccatccaggccctgttcagtgtgtacagttcaaccctagat atatgatgttagccacagcctgtaccaatatggcgttctggttaccttacatcgatgactga |
|
Protein
| Protein ID | pfu_aug2.0_132.1_06992.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_132.1_06992.t1 MKLTDNVVRNFKVAKIFRENTDRINRIDFSTCGNTLISSSDDDSIVIYDCQNGTPKKTLNSKKYGVDLICYTHAVNTALH GSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVSLNMSPINDSFLSGSLDKTIRLWDLRSQNCQGLMHLPGRPVAAFDPEGL IFAAGINSECVKLYDLRSFDRGPFTTFKLTQDKDCDWTGMKFSPDGKLILISTNGQVLRLIDAFQGTPLQTFMGFQNNKG VALEASFSPDSRFAFCGSTDGRIHCWNTETGVKVAVMNCDHPGPVQCVQFNPRYMMLATACTNMAFWLPYIDD |
|