Gene
| Gene Model ID | pfu_aug2.0_132.1_06994 |
|---|---|
| Locus | scaffold132.1 : 44116 ... 61663 : + |
| To GenomeBrowser | scaffold132.1:44116..61663 |
| Genes list of scaffold | scaffold132.1 |
| Synonym | pfu_aug1.0_7677.1_38623 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin-like modifier-activating enzyme atg7 | GO:0000407 GO:0000422 GO:0005829 GO:0006501 GO:0006995 GO:0007420 GO:0009896 GO:0016236 GO:0019778 GO:0019779 GO:0030163 GO:0031325 GO:0031399 GO:0032446 GO:0034727 GO:0044805 GO:0048666 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_132.1_06994.t2 | 1 | 1 | ThiF | 213 | 364 | 1.2e-31 | 109.3 | 2.4e-35 | 1.8e-31 | 108.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_132.1_06994.t2 | gi|194018614|ref|NP_001123394.1| | ubiquitin-like modifier-activating enzyme ATG7 [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_132.1_06994.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_132.1_06994.t1 atgaggtggcgtctcataccggagctaaatttagaaaaaatctcgcgaacaaaatgtctgttacttggagcaggaactct aggatgtaatgtggctcgctgcttgttgggatggggtattaagaacttaactttagtagacaatggtaaaatatcgtact ctaaccctgtacgtcaatcgctgttcatatttgaggattgcatgaagggagggaaaccaaaagcagaaactgctgcagag gctctcaaaagtatttttcctggtgtgaatgctagaggagttagtttgtctattccaatgccagggcatgctgtaccaga cagttctgtaaatcttgttaaaaaagatgtagaagtattggatgaattagttaatgcccatgatgcaatattcctgctct tggataccagagagagtcgttggttaccaactgtcatggctgctgctaaaagaaaaattgtgatatgttccgctctcgga tttgatacgtttttggtgatgcgtcacggcgttaagacgaagagttcgtcacaaactccacaaaaactctctatggacat ggtcataccaggagatcagttaggatgttacttctgtaatgacgtagtagctcctggaaattccacaaaagatcggacgt tagaccagcagtgtacagtgtccagacccggcatgtcttatatggccagtgctatggcagcagagctactggtatcggta ctacaacatgacgagggtgcattggcccctgcagacactagtgccaaagaagaaaacctgaccaaagatctgccatgtgc cttgggacttgtaccacaccaaatcagatgtttcctgtcccgtttccaccaggttttaccagcgtgccgagcctttgata aatgtacagcatgctcagatatggttgttaactcattcaagaaagacggttttgagtttctgctaaaggctttcaacaat ccaagtttcctggaagatttgacgggactaacacagatgcatcaagaaacaatggatgcggaggtttggggttttagtga tgatgaggaatgcagtagtatagagatgacttga |
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| Transcript ID | pfu_aug2.0_132.1_06994.t2 |
| Definition | - |
>pfu_aug2.0_132.1_06994.t2 atggaccaatccgggcctcttgtcacaattttctcttcttacttttgctcagaggaatttactctgaattcacctccagt ttccctgggtaattcatggaatagtcaacagacgaaagatttccttacagagtatgatagattccagaccagtcagggac aatatacgggttatttccttgtcgtactttcagcggatggattcaaagtcaatagcttgagcagccttagtcaagttaac acggaaaattcaaaggtatattttggctttgccgacccatgtacattagatgtcaatccaggctggcccctccgaaacta cctgatgctgattggctaccactgtgcacatctactgaatacagacgtgttgtgtttacgtgatcgtagtaaagacggaa tgagagatgtatcacatagtctgttaatgtctgtacggatgtcaaacgtcagagatttacaagaatgtccaaaatgtgtt ggttgggaaaagaatgagaagggaaaacttctacccagagttgtagaccttagtgctagtatggaccctacaaggttagc ggaatctgctgtcgatttaaacctgaagttgatgaggtggcgtctcataccggagctaaatttagaaaaaatctcgcgaa caaaatgtctgttacttggagcaggaactctaggatgtaatgtggctcgctgcttgttgggatggggtattaagaactta actttagtagacaatggtaaaatatcgtactctaaccctgtacgtcaatcgctgttcatatttgaggattgcatgaaggg agggaaaccaaaagcagaaactgctgcagaggctctcaaaagtatttttcctggtgtgaatgctagaggagttagtttgt ctattccaatgccagggcatgctgtaccagacagttctgtaaatcttgttaaaaaagatgtagaagtattggatgaatta gttaatgcccatgatgcaatattcctgctcttggataccagagagagtcgttggttaccaactgtcatggctgctgctaa aagaaaaattgtgatatgttccgctctcggatttgatacgtttttggtgatgcgtcacggcgttaagacgaagagttcgt cacaaactccacaaaaactctctatggacatggtcataccaggagatcagttaggatgttacttctgtaatgacgtagta gctcctggaaattccacaaaagatcggacgttagaccagcagtgtacagtgtccagacccggcatgtcttatatggccag tgctatggcagcagagctactggtatcggtactacaacatgacgagggtgcattggcccctgcagacactagtgccaaag aagaaaacctgaccaaagatctgccatgtgccttgggacttgtaccacaccaaatcagatgtttcctgtcccgtttccac caggttttaccagcgtgccgagcctttgataaatgtacagcatgctcagatatggttgttaactcattcaagaaagacgg ttttgagtttctgctaaaggctttcaacaatccaagtttcctggaagatttgacgggactaacacagatgcatcaagaaa caatggatgcggaggtttggggttttagtgatgatgaggaatgcagtagtatagagatgacttga |
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Protein
| Protein ID | pfu_aug2.0_132.1_06994.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_132.1_06994.t1 MRWRLIPELNLEKISRTKCLLLGAGTLGCNVARCLLGWGIKNLTLVDNGKISYSNPVRQSLFIFEDCMKGGKPKAETAAE ALKSIFPGVNARGVSLSIPMPGHAVPDSSVNLVKKDVEVLDELVNAHDAIFLLLDTRESRWLPTVMAAAKRKIVICSALG FDTFLVMRHGVKTKSSSQTPQKLSMDMVIPGDQLGCYFCNDVVAPGNSTKDRTLDQQCTVSRPGMSYMASAMAAELLVSV LQHDEGALAPADTSAKEENLTKDLPCALGLVPHQIRCFLSRFHQVLPACRAFDKCTACSDMVVNSFKKDGFEFLLKAFNN PSFLEDLTGLTQMHQETMDAEVWGFSDDEECSSIEMT |
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| Protein ID | pfu_aug2.0_132.1_06994.t2 |
| Definition | - |
>pfu_aug2.0_132.1_06994.t2 MDQSGPLVTIFSSYFCSEEFTLNSPPVSLGNSWNSQQTKDFLTEYDRFQTSQGQYTGYFLVVLSADGFKVNSLSSLSQVN TENSKVYFGFADPCTLDVNPGWPLRNYLMLIGYHCAHLLNTDVLCLRDRSKDGMRDVSHSLLMSVRMSNVRDLQECPKCV GWEKNEKGKLLPRVVDLSASMDPTRLAESAVDLNLKLMRWRLIPELNLEKISRTKCLLLGAGTLGCNVARCLLGWGIKNL TLVDNGKISYSNPVRQSLFIFEDCMKGGKPKAETAAEALKSIFPGVNARGVSLSIPMPGHAVPDSSVNLVKKDVEVLDEL VNAHDAIFLLLDTRESRWLPTVMAAAKRKIVICSALGFDTFLVMRHGVKTKSSSQTPQKLSMDMVIPGDQLGCYFCNDVV APGNSTKDRTLDQQCTVSRPGMSYMASAMAAELLVSVLQHDEGALAPADTSAKEENLTKDLPCALGLVPHQIRCFLSRFH QVLPACRAFDKCTACSDMVVNSFKKDGFEFLLKAFNNPSFLEDLTGLTQMHQETMDAEVWGFSDDEECSSIEMT |
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