Gene
| Gene Model ID | pfu_aug2.0_132.1_06997 |
|---|---|
| Locus | scaffold132.1 : 127516 ... 140914 : + |
| To GenomeBrowser | scaffold132.1:127516..140914 |
| Genes list of scaffold | scaffold132.1 |
| Synonym | pfu_aug1.0_1360.1_43991 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_132.1_06997.t1 | 1 | 1 | Peptidase_M13_N | 459 | 829 | 1.7e-17 | 63.5 | 5.3e-21 | 2.6e-17 | 62.9 |
| pfu_aug2.0_132.1_06997.t1 | 1 | 1 | Peptidase_M13 | 941 | 1069 | 4.3e-10 | 39.1 | 1.7e-13 | 8.6e-10 | 38.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_132.1_06997.t1 | gi|562854271|ref|XP_006155746.1| | PREDICTED: LOW QUALITY PROTEIN: zonadhesin [Tupaia chinensis] | 6.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_132.1_06997.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_132.1_06997.t1 atgccctggtggtcgggtgacatccgggacttttcagaggaggagtttcacggttacttcggggatatccgctctgtagc tgtccgcacgctgcccagacgtccgccaaaggagttgctggcgttattgaattcggacatccatggaatacccgaaccgg gacgaccgggggagctagttttggcctcgcccgtcaaatccgggggagtctatgtgcacggacgaccaaacccagcttat tcattctatgactttgattgggaccttcccgttgcacaagggacaggggaattcagttatcatccgtccaattccaatac cgaatctcagcatgggaacggaagaggaaatgccccaaagaaaagaagtacttgttcgcaagtagagaaaacaatgctgg ccatatctggttatttggccgtggccatcttgattctcatcattatagtcggcgttcttgtagtgtctcttcagaacctg gacaataatattgatgaactaaaatcgatcgctgctccgctgctccgtgctagatcgaaaaacaatgaatcgaccactat tacttcattttcaccaacaacaataaagcaacggacaacaaaaccgaccgcaacaaccctgagattgatgaaatcgacaa ctcctatatcgactccacaatcaacaacaccaaagacaacaccaaaaccaacaactacaacacctaaaccaacaacaaca acaccaaagccgacgactacaacaccaaagccgactacaacaccaaagccgacaactacaacaccgaagccgaccacaac aacaccaaagccgacaactacaacaccaacggcgacaacaacaccgaagccgaccacaacaacactaaagtcgacaacta caacacctacgactacaacaacaaagccgacaacaacaccaaaacctacgactacaacaccaaagcctacaacaacacca aaacctacgacaataccaacgacaacactaaagccgacgactacaacaccaaaaccaattacttcaacatcaaagccaac gactacaacaccaaagccgaccacaacaacaccaaagcccacgactacaacaccaaaaccaacgacaacaacaccaaagc cgacaacaacaacaccaaagccgaccacaacaacaccaaagccgaccacaacaacaccaaagtccacgactacaacacca aagcccacgactacaacaccaaagccgacaacaacaacacctcagccatcgacaactgaagctccgatgaccaccaaagg accagaaacatgcgattcacaatattgcagctccttagcttatgatatgttagggcgcataaattccaccatagacccgt gtgttgatttttatcagaaactaagagagatgcttgagttgcctacgtcatcacaggattccgtcaatttgagggccatc aaaatgcactatcaaagctgctttgcaacaaacacgttaccagatgacgataaagttacgaaggatatagttcagaccct acagacactgttcttcagtagagataccctgagttccttcaccagaccagctgaaatgcagtttgttggtgttagtcaaa tgggcagtccatctttgtacaattatgacgtagttgctgacatcatttccggaacaaaattattcgctttacaattagag ccaccacccacatttttacctatggagttctacgaattttcattagacgtaaatcaagtggcctctagctatcttgacaa gcttaccaacataatggagagagtgatggggtggacatccggaggtgagggtgactatggtgaatacgctggaggggatc tgtatgactactatggcggcaatgacggtgccgacacatcaaataagacactgagagaaaggttaacagaaaggctcaga gaagtctttgaattcgaaagagcattcgcaagggtgctgaaagactctgaaaacgattcatcgacagtattcatgacccc ggcagaactcgctaacaactacccggaacttcagctacggtctggactaccgtacgaacaaactctacaaggctctcctc cagtaaagctgaagtcccctacttactttcagcttctgaacgaactgatgaaaacaacaaacgaaggagtggtccagaca tttatatattctcgcatactcctccaccttcttcagttcactcctgttcaaacacgaagacttatggataatatttatag cgatgacgtcacatcggaagtgacaagagtagactgcgtgaattccactttgcagcttctgaaagaagagacccttgaac aatactcgttaataaattcaaatattacttccatcacaaagccatatttcacatctttagttcagaatcttactcaggtt gtcattcagatcgtatcgtcgtctgcaacgctaagtgagcagacgaaacagaacatgtttcaaagactgttttcactaca aaccaaagtttccccggtgccaaccatcagtttacagttatcattatccgacaatccagaaatttcattcctatttagag cccaaatggcaagcgctatcagaatgtacagggaatactcgaaaataggttcaccggttacatttccggttgaggtgact tggtacgacttccggcccgattacgacccggacattgggattctaggaatccccttcgccatgttgacagattttaccga agtaaaaccagagtttcctattatttcctcttccggttggaagctcgccgctgaaatgatcagtgccatttacggatctt tggggagggaagtggcgccatcttggtggagttctgaatcacgtgacattctgacatccaatcagaactgttatctcaat cagttgtacgaatcaccatctgtagaaggaagtgaaagagtcggcgcaataatgtccggacaagcaggtctgcagctggt agatttggaatatgagagattacttgggaacggtgatgtaaaatcttacattctaccatttgtttctttcacacctcagg aatttttctacatatcttttgctcagggcatgtgtgaggtacctagaagctcctctgtcatcttggatcattacagagtg aacaacattttgagaaacatgaagaattttgcagatactttcaaatgtggcaatacaacaaatatgaacccagtgcaaaa atgcagcatgttatga |
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Protein
| Protein ID | pfu_aug2.0_132.1_06997.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_132.1_06997.t1 MPWWSGDIRDFSEEEFHGYFGDIRSVAVRTLPRRPPKELLALLNSDIHGIPEPGRPGELVLASPVKSGGVYVHGRPNPAY SFYDFDWDLPVAQGTGEFSYHPSNSNTESQHGNGRGNAPKKRSTCSQVEKTMLAISGYLAVAILILIIIVGVLVVSLQNL DNNIDELKSIAAPLLRARSKNNESTTITSFSPTTIKQRTTKPTATTLRLMKSTTPISTPQSTTPKTTPKPTTTTPKPTTT TPKPTTTTPKPTTTPKPTTTTPKPTTTTPKPTTTTPTATTTPKPTTTTLKSTTTTPTTTTTKPTTTPKPTTTTPKPTTTP KPTTIPTTTLKPTTTTPKPITSTSKPTTTTPKPTTTTPKPTTTTPKPTTTTPKPTTTTPKPTTTTPKPTTTTPKSTTTTP KPTTTTPKPTTTTPQPSTTEAPMTTKGPETCDSQYCSSLAYDMLGRINSTIDPCVDFYQKLREMLELPTSSQDSVNLRAI KMHYQSCFATNTLPDDDKVTKDIVQTLQTLFFSRDTLSSFTRPAEMQFVGVSQMGSPSLYNYDVVADIISGTKLFALQLE PPPTFLPMEFYEFSLDVNQVASSYLDKLTNIMERVMGWTSGGEGDYGEYAGGDLYDYYGGNDGADTSNKTLRERLTERLR EVFEFERAFARVLKDSENDSSTVFMTPAELANNYPELQLRSGLPYEQTLQGSPPVKLKSPTYFQLLNELMKTTNEGVVQT FIYSRILLHLLQFTPVQTRRLMDNIYSDDVTSEVTRVDCVNSTLQLLKEETLEQYSLINSNITSITKPYFTSLVQNLTQV VIQIVSSSATLSEQTKQNMFQRLFSLQTKVSPVPTISLQLSLSDNPEISFLFRAQMASAIRMYREYSKIGSPVTFPVEVT WYDFRPDYDPDIGILGIPFAMLTDFTEVKPEFPIISSSGWKLAAEMISAIYGSLGREVAPSWWSSESRDILTSNQNCYLN QLYESPSVEGSERVGAIMSGQAGLQLVDLEYERLLGNGDVKSYILPFVSFTPQEFFYISFAQGMCEVPRSSSVILDHYRV NNILRNMKNFADTFKCGNTTNMNPVQKCSML |
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