Gene
| Gene Model ID | pfu_aug2.0_132.1_07002 |
|---|---|
| Locus | scaffold132.1 : 200077 ... 204682 : - |
| To GenomeBrowser | scaffold132.1:200077..204682 |
| Genes list of scaffold | scaffold132.1 |
| Synonym | pfu_aug1.0_570.1_43734 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_132.1_07002.t1 | 1 | 1 | fn3 | 122 | 188 | 2.1e-07 | 30.9 | 1.9e-09 | 7.8e-07 | 29.1 |
| pfu_aug2.0_132.1_07002.t1 | 2 | 1 | AIG1 | 214 | 244 | 8.2e-07 | 28.3 | 7.8 | 3100.0 | -3.0 |
| pfu_aug2.0_132.1_07002.t1 | 1 | 1 | AAA_29 | 260 | 284 | 2.0e-06 | 27.2 | 1.2e-08 | 4.9e-06 | 25.9 |
| pfu_aug2.0_132.1_07002.t1 | 1 | 1 | Septin | 265 | 350 | 3.9e-07 | 29.3 | 1.8e-09 | 7.2e-07 | 28.5 |
| pfu_aug2.0_132.1_07002.t1 | 2 | 2 | AIG1 | 265 | 426 | 8.2e-07 | 28.3 | 4.2e-08 | 1.7e-05 | 24.0 |
| pfu_aug2.0_132.1_07002.t1 | 2 | 1 | MMR_HSR1 | 266 | 387 | 2.7e-06 | 27.3 | 4.7e-08 | 1.9e-05 | 24.6 |
| pfu_aug2.0_132.1_07002.t1 | 2 | 2 | MMR_HSR1 | 491 | 518 | 2.7e-06 | 27.3 | 3.3 | 1300.0 | -0.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_132.1_07002.t1 | gi|558140596|ref|XP_006118411.1| | PREDICTED: uncharacterized protein LOC102448954 [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_132.1_07002.t1 | gi|340380012|ref|XP_003388518.1| | PREDICTED: uncharacterized protein LOC100640421 [Amphimedon queenslandica] | 0.0 |
| pfu_aug2.0_132.1_07002.t1 | gi|632987816|ref|XP_007882765.1| | PREDICTED: uncharacterized protein LOC103171780 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_132.1_07002.t1 | gi|558226011|ref|XP_006137172.1| | PREDICTED: uncharacterized protein LOC102457665 [Pelodiscus sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_132.1_07002.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_132.1_07002.t1 atggacgactttaccttaagatatatcgcgaggaataatccaaacagtgaggagcgtgtcatagtcactgataaaaatgt actcgttgtcaccgtttcatctaggtcagcgtcatgtaattcaaatacgcatgcgcaagactccggaagtatggcggcca tatcctattgcacagactgtggcgttgcgttatgtacagactgcttgtcaaatcatcaaagttctaatcattatgtcgta agctgcgggcagttccctgaccccgtcatagtccagtcttctgtccgggatatttctgatactcaagtgaacaagtccag ttctaatggatttacatgttcaagtagcgatttaaagccggcagccatcgacgtagattgcactagtattgttttggctt ggcccagaccaacatatgaggacaacatccaacattatgaaattaggtacagaaaatgtcacgatgtaagatggcagaag ataccaactaacgatatgaccgagtgtattctgctccaatctttggcgccaaatgtctcgtacgaaacacaggtcagacc cgtctttgtcgacagggagggaccatacggacctaagagtgaccccataaagacaaaaaagtccttggcgcaaaatctta gggacgacaggtctaaaacagtaaaaatctgtgacggcacgccttcattatacagagtgcagctacacgagaaagagggt tctgtcaacacaatagataaaacaaggaaatgctacattaaaggcagacatcgtacaggcgtccccgagaaaacagtttt acttgtcggagccaccggatctggtaaaactaccctaatagacgccatatttaaccacgttctgggtatggaatggtcgg acgatttccgctttacagtggttaatctgaagcaggaggagaacgctagaaagcacgatcaggctttgtctcaaacggat tggatcacctgctatgaaattccttgtatggacgggagtaaggtcgattttaaactgaacttggttgatacacctggctt tgccgacacaagaggtattgaaagggatacaactcttgtacgacagataaggagtttcttcacgcctcgcggtgacacgg gtataaataagatcgatgccttgtgctttgtggtccaagcacctttagtccgattgtccgcagctcagagatacgtgttc gatgggattttgtccatatttggcaaggatattattgggaacatttttatgttaataacatttgctgatgggtcagatcc ggttgtactatcatctctgaaggaagctaaaatcccatatgaaaaatatttcacatttaataattcagccttatttgcaa acaatgtttcagaccaaacaccgttttcaaagtcattttggcaattaggggaggaaagttatcaaattttcttcaaagaa ctggtgacgtttaaaccgaaaagtcttcttttgacatccgaggtgttagagaacagggaaagactagacgcaatcatggt aggattattagatgacataaaatcaggtcttaataagatggaaaatattcgccaggaagaacacgcgcttaaccaacacg aggcatgtattcgcgcaaacaaaaattaccggtataaggtcaaagaaaacaaaatgaaccacataaaattaaaaccggga gaaaatgccttgaattgtctacgatgtcacagaacatgtcatttcccgtgtatatgtaggacaggagcagtcgcttccag ctataactgtactgttatggactcaaacaacaaatgcacaatctgtgccgacaaatgtccaatggctgatcattgcgaca ccggatataggtacgagttatctaccgtagagaaggaacggacttacgaggaattgaaaagcagatttgacgatgctaaa agtaaagaatctaagagtaaatcagctctcaaaaaattaaaatatgagtatggacaaatgcataaacaagttcaattttt gataaatagtgcacgtgaatgttttaaccagttaagcaatattgcgttgcgaccaaatcctttaaatgaatcagattata ttgatttactaataacaaatgaaaaacaggacggttctgttggatatttagagaggatagaaatgatctatcttttctaa |
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Protein
| Protein ID | pfu_aug2.0_132.1_07002.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_132.1_07002.t1 MDDFTLRYIARNNPNSEERVIVTDKNVLVVTVSSRSASCNSNTHAQDSGSMAAISYCTDCGVALCTDCLSNHQSSNHYVV SCGQFPDPVIVQSSVRDISDTQVNKSSSNGFTCSSSDLKPAAIDVDCTSIVLAWPRPTYEDNIQHYEIRYRKCHDVRWQK IPTNDMTECILLQSLAPNVSYETQVRPVFVDREGPYGPKSDPIKTKKSLAQNLRDDRSKTVKICDGTPSLYRVQLHEKEG SVNTIDKTRKCYIKGRHRTGVPEKTVLLVGATGSGKTTLIDAIFNHVLGMEWSDDFRFTVVNLKQEENARKHDQALSQTD WITCYEIPCMDGSKVDFKLNLVDTPGFADTRGIERDTTLVRQIRSFFTPRGDTGINKIDALCFVVQAPLVRLSAAQRYVF DGILSIFGKDIIGNIFMLITFADGSDPVVLSSLKEAKIPYEKYFTFNNSALFANNVSDQTPFSKSFWQLGEESYQIFFKE LVTFKPKSLLLTSEVLENRERLDAIMVGLLDDIKSGLNKMENIRQEEHALNQHEACIRANKNYRYKVKENKMNHIKLKPG ENALNCLRCHRTCHFPCICRTGAVASSYNCTVMDSNNKCTICADKCPMADHCDTGYRYELSTVEKERTYEELKSRFDDAK SKESKSKSALKKLKYEYGQMHKQVQFLINSARECFNQLSNIALRPNPLNESDYIDLLITNEKQDGSVGYLERIEMIYLF |
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