Gene
| Gene Model ID | pfu_aug2.0_132.1_07003 |
|---|---|
| Locus | scaffold132.1 : 210773 ... 217000 : + |
| To GenomeBrowser | scaffold132.1:210773..217000 |
| Genes list of scaffold | scaffold132.1 |
| Synonym | pfu_aug1.0_20393.1_11313 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_132.1_07003.t1 | 1 | 1 | fn3 | 429 | 504 | 5.8e-13 | 48.7 | 1.8e-15 | 1.7e-12 | 47.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_132.1_07003.t1 | gi|564268034|ref|XP_006272817.1| | PREDICTED: uncharacterized protein LOC102566478 [Alligator mississippiensis] | 0.0 |
| pfu_aug2.0_132.1_07003.t1 | gi|688551430|ref|XP_009299158.1| | PREDICTED: uncharacterized protein LOC101882025 [Danio rerio] | 0.0 |
| pfu_aug2.0_132.1_07003.t1 | gi|641783785|ref|XP_008174252.1| | PREDICTED: uncharacterized protein LOC101932117 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_132.1_07003.t1 | gi|557331040|ref|XP_006038377.1| | PREDICTED: uncharacterized protein LOC102383910 [Alligator sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_132.1_07003.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_132.1_07003.t1 atggcttcggcttcctgttcatacaaatgtggattatgtgaggaactagggaaagacgaagaagcaacctgtgtatgcag ggactgtgatgactacctgtgtgacaactgtaggaaacaacactctgttatcaaagctacaaagaatcatgacgtcaaag atataaacaaacagcaaggcaattttggtcaaggtcaagaagatgacgtatacttctgccaactgtgtctcgctgtcggc aaagatcaaacagcaactagatattgtaaagactgtgaaatgtatatctgcgagtcgtgtcatcgtcaacattcatcaat tggagcgacgaaaaatcacgacgtcagatcactatctgctaaacctgttgaggactgcgtcctttgtgttgtgagcgata taaaatccgctgctgcataccattgtaaagaatgccagtttcctctgtgtaacagctgcaccatcaagcatcaacatatg agatccacaaggaatcatctaataactgatgtatctggtcgcccgatatcaaacgtaaaaccggaagagtcaacatctcc agttgtagacagcgactttctaacttcctcaatgtctgatgtatccttagataaaaagccaaagcagacgtcgtggcaga aagcgcaagcgccgactaaaaaggcacagaaaaatgagccacaatcaacaagacctaaggaacctcctcaaggacaaagg tatcaatctgatgacactggacaatctaataggggacaaccaatgccagcgcaacaaatgtatagcagacagagtccaag tcgccgacaggaagctactggtaatgagtatgagaatgggcggagagatcgatctccacaaccttatcagcagtccgggg aagtcagatccccttcaagcaaacccatccgacgacacgaatctcctggtcatgattatgacaatggacggagaggtact gaccgacgacatgaggcttctggtcttgattatgacaatggtcggagaggtaccgatcgacgacaagaagctcatggtca tgattatgacaatggacggagaggtaatgaccgacgacaagaagcttctggtcatgattatgacaatggacggagaggta ctgaccgacgacatgaggctctcggtcgtgattatgacaatggacggagaggtaatgaccgacgacatgaggctcttggt catgattatgacaatggacggagagatagatctccacagccttaccaacaggtcggggaagtcagatcctccacaagcaa accagaaatttttaacattactcctgaatcagttgaactgtcatgggaaagaccctcaaggaaagaaaaagtggattact acgaaataagatataagaaagttagtgaaaccaaatgggagactttctgcactagggacgggagatgctcagcaatagta atggggttgaagtgtagtaccaaatatcacttcaaagtacgtgcagtatacaacgacgaggagggtccgtacacggatgt aagttcaacggtagagacaaagccctccttggctaaggagctggtcggatttgcactaaagcaagatagagggaagccgg cgaagtacaaaataccaataactgaaactgcgaaaaacaggcatgcaaggacaagaaaatgtgttgtggggcaatccagc ggtgggaaaggaagccctatagaaaaaacaattatgttagttggagcaacaggagccggtaaaagtacacttttggacgg aatgatgaattatatcacgaatgtggcattcaacgatgaatttagatttactgttgtggacttgatggaagacgaaaaga aaaaagcacaaaatcagggaactgttctgcatcgacaaattataangcttgctcgtctgacaccaacacaacggtatatt tttgattccattatgtctgtttttggaaaagatatcgcgtcaaatatcgtcatcatgataacatttgctgatgggaacac tcctccagttttagcagcattgaaggctgggaaggttccatttaaagaacactttgtgttcaataattccgcgttgtttg ctcaagaaactgagaaatttgcaccaatgttttgggacatgggtcgagaaagtttccgtactttctttgatcatttgtta ggaatgcaaacacgtagtcttagtcttacagctgaagtattgaaagaaaggaaacaactagagcagaccgtgaatggact cctaccacaggttgacagaggtctaaacaagatggaggaaattagacgtcataggctgttactcaatcaacataaattag aaatggacgccaacaagaatttcagatttaaggacaagagaactcgcgacaaaaagatcgagttagaggcaggcgtccac gtcaccaactgtttacactgtcatcagacctgccatttcccatgtcaactaccgaacgatgaccagaaggcgggttgtgc agccatggcatcagatggttactgtacggtatgcaaaaataaatgctattggaataatcacgtcaacaatggatacaaga tagaaatgtacgaggaagaatatgaaggaacatatgaagaattgctgaagaagtataacgtagctaagaatagcataaac aaaacaaagagtctgttacataacatgaaagatgaattcgctaagataggcacagaggtgcacagtctgatcacagagat caacaggtgcttaaaccgcctgaaaaatatagctctgaaaccagatcctctgaatgatgtacagtatattgaacagttga tagaggcagagaagatgaataagaagccagggttccaaggtagaatcaagtctctagaaaacatcaagaagcaagctgaa gtgacaacaaaagttcacagaggaacattcaatccctttgttgggtttgatatggaagacgattaa |
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Protein
| Protein ID | pfu_aug2.0_132.1_07003.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_132.1_07003.t1 MASASCSYKCGLCEELGKDEEATCVCRDCDDYLCDNCRKQHSVIKATKNHDVKDINKQQGNFGQGQEDDVYFCQLCLAVG KDQTATRYCKDCEMYICESCHRQHSSIGATKNHDVRSLSAKPVEDCVLCVVSDIKSAAAYHCKECQFPLCNSCTIKHQHM RSTRNHLITDVSGRPISNVKPEESTSPVVDSDFLTSSMSDVSLDKKPKQTSWQKAQAPTKKAQKNEPQSTRPKEPPQGQR YQSDDTGQSNRGQPMPAQQMYSRQSPSRRQEATGNEYENGRRDRSPQPYQQSGEVRSPSSKPIRRHESPGHDYDNGRRGT DRRHEASGLDYDNGRRGTDRRQEAHGHDYDNGRRGNDRRQEASGHDYDNGRRGTDRRHEALGRDYDNGRRGNDRRHEALG HDYDNGRRDRSPQPYQQVGEVRSSTSKPEIFNITPESVELSWERPSRKEKVDYYEIRYKKVSETKWETFCTRDGRCSAIV MGLKCSTKYHFKVRAVYNDEEGPYTDVSSTVETKPSLAKELVGFALKQDRGKPAKYKIPITETAKNRHARTRKCVVGQSS GGKGSPIEKTIMLVGATGAGKSTLLDGMMNYITNVAFNDEFRFTVVDLMEDEKKKAQNQGTVLHRQIIXLARLTPTQRYI FDSIMSVFGKDIASNIVIMITFADGNTPPVLAALKAGKVPFKEHFVFNNSALFAQETEKFAPMFWDMGRESFRTFFDHLL GMQTRSLSLTAEVLKERKQLEQTVNGLLPQVDRGLNKMEEIRRHRLLLNQHKLEMDANKNFRFKDKRTRDKKIELEAGVH VTNCLHCHQTCHFPCQLPNDDQKAGCAAMASDGYCTVCKNKCYWNNHVNNGYKIEMYEEEYEGTYEELLKKYNVAKNSIN KTKSLLHNMKDEFAKIGTEVHSLITEINRCLNRLKNIALKPDPLNDVQYIEQLIEAEKMNKKPGFQGRIKSLENIKKQAE VTTKVHRGTFNPFVGFDMEDD |
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