Gene
| Gene Model ID | pfu_aug2.0_132.1_07008 |
|---|---|
| Locus | scaffold132.1 : 267743 ... 279738 : + |
| To GenomeBrowser | scaffold132.1:267743..279738 |
| Genes list of scaffold | scaffold132.1 |
| Synonym | pfu_aug1.0_16120.1_32642 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_132.1_07008.t1 | 3 | 1 | CARD | 13 | 94 | 3.7e-15 | 55.5 | 1.2e-13 | 9.0e-10 | 38.2 |
| pfu_aug2.0_132.1_07008.t1 | 3 | 1 | Reo_sigmaC | 120 | 236 | 8.7e-08 | 31.7 | 7.7e-06 | 0.057 | 12.5 |
| pfu_aug2.0_132.1_07008.t1 | 3 | 2 | CARD | 131 | 153 | 3.7e-15 | 55.5 | 0.83 | 6200.0 | -2.9 |
| pfu_aug2.0_132.1_07008.t1 | 3 | 3 | CARD | 398 | 470 | 3.7e-15 | 55.5 | 1.1e-07 | 0.00079 | 19.2 |
| pfu_aug2.0_132.1_07008.t1 | 3 | 2 | Reo_sigmaC | 524 | 632 | 8.7e-08 | 31.7 | 5.5e-10 | 4.1e-06 | 26.2 |
| pfu_aug2.0_132.1_07008.t1 | 3 | 3 | Reo_sigmaC | 644 | 756 | 8.7e-08 | 31.7 | 0.0022 | 16.0 | 4.5 |
Transcript
| Transcript ID | pfu_aug2.0_132.1_07008.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_132.1_07008.t1 atgtcacagaagttgaatccggataacgaaaggaaattatggcggaactggatgttcctgaagcaggaattggacgtacc gacagtgacagacaaactgatagaagctggggtctatacacaggctcataaggagagcattaagaatgtgaaacccaatt caaagcttgtcagagccgagaaatttcttaacatactgttggaaagaggggagagaggatttcaagcgttctgtcaaata ttacgagaagatgagaacaacaagttcgcagaggtcatggaaaagctggagattccggcgaaaaaggaagatgaagtgcg gcccaataccggatcatccacatcgaggataactaaaacaacaaataataaccctgtcggggttgatgaactaaatcgct tgaaggaagaaaatgaacgacttagaaagacgaatcggtctctgatagataagctgaatgagtttcagaaacagattatt cagttgcaattggagaataagaggctgagagataccgggactggggctagccagacgaagattgaactgaaaaagaaagc acaagagttggacgaactcaagacgaagatagatcaacagaggaaagagctggatgaaaaagaacaagagctgaatgaac aattaaaaaagattcaagaaattgaaactgaaaatgaaaaacaaaaattacaaatcatgaaccttgaaattttacatgag gaaggtgtgagtgaacgaaatcggcagcaagctgaaataagagaactcagagaagagaaggaaattcagaagacgcgaat tgagatactggaagatatgcaaagacgtgatgaagacagattatataaacttgaagaacgtttacgaatgcttgaacaat ggaactcgacccagtctcaaaacacaagcagcagttatagatatacacgggaaagggatcgtagacgtagttcaagagtt atgtccccgcctagaagtcatccatggatgagtggtgtacaagtcaacagatcgcaccatgccaacgtcaaattccagcc tccgccgccaaggggaggaggagggggacaggaacagacgttcaggatgagtttgtcttcctcacaagatgatcgaaagg cggtcagatttaaccctagtatagaacagacccggctggaaggaaaatggagttttctaagatatctccttacactccat gaggacattaacattcagattatcgcagacactttggaggacagaggggtgctctcacctacctcaaaagaggagatatt tcaactaaataatcaccgagagaagacggaaaagtgtttagagaaagtgtcgttggcaggatcaaactcttacaccacgt tctgtgaggtactgagggattgtgggtataatcacgtggtcgactctatgaaaatagagggcgaagatgatgacgattca ctgagcaaatatacattaaattcagatgaattttacgaaaagacatccaaggaggtgtctatgccatgggatggtacaac agtactgatacaatctccactcacctctcctagacaactagacagggaaaatacgagcgatctctccgtcgtcggacgca aaatggcgctatcaaatctgtcaaaggacgccaaatctacacaaaaagaattcaacagtattgtgcaaaagcagtccgag ctagaacgccaacttatggatgtaatgaaatcgctggacgccgcgaaagacgctttggttcgcgagaggcacgaaaaaca acagctacaagaacaattgaaaaagcgaaatgacgaaatagcagacgttcatcgcaaatacagagatttgcagaatgcaa tgagcaaattaaaagaaacgaataataaatttcacgaccgcattacgaagctacagatcgagaacgagcaactgcgcagg tctgcacgtgagagatcctcgctgcagattgagctcaatgaaaaacagactcaaattatggagctaaagggtacaattga agaccagagtaaacaaatcactcatcaagaaagtttgatcgacaaaaaacttaacgtcgtggagcagctagctctggatc atcagaaacttgctgatggtcagatgaaactagaggacatcattagatgtcagaccgaccaaatctcgcgtcttctctcg gacaaagaggacgccacccaccaactgacaatccaacagcgtcaattgagcacgcaacaggcgtcaatcgccatgatgca ggaacatctagaacgcttagaaatgagcatgattgctcagagtgagcaacagaacgttttggcaatttgcccacaggaac ctagcaaccggaacagacgacaacctattactacaaaaccgacattttcccgcccttttaatgtagggaaacctgaaaat tccaagaacatgcactggaaacttgccgcgactacagccaaaccgaagtag |
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Protein
| Protein ID | pfu_aug2.0_132.1_07008.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_132.1_07008.t1 MSQKLNPDNERKLWRNWMFLKQELDVPTVTDKLIEAGVYTQAHKESIKNVKPNSKLVRAEKFLNILLERGERGFQAFCQI LREDENNKFAEVMEKLEIPAKKEDEVRPNTGSSTSRITKTTNNNPVGVDELNRLKEENERLRKTNRSLIDKLNEFQKQII QLQLENKRLRDTGTGASQTKIELKKKAQELDELKTKIDQQRKELDEKEQELNEQLKKIQEIETENEKQKLQIMNLEILHE EGVSERNRQQAEIRELREEKEIQKTRIEILEDMQRRDEDRLYKLEERLRMLEQWNSTQSQNTSSSYRYTRERDRRRSSRV MSPPRSHPWMSGVQVNRSHHANVKFQPPPPRGGGGGQEQTFRMSLSSSQDDRKAVRFNPSIEQTRLEGKWSFLRYLLTLH EDINIQIIADTLEDRGVLSPTSKEEIFQLNNHREKTEKCLEKVSLAGSNSYTTFCEVLRDCGYNHVVDSMKIEGEDDDDS LSKYTLNSDEFYEKTSKEVSMPWDGTTVLIQSPLTSPRQLDRENTSDLSVVGRKMALSNLSKDAKSTQKEFNSIVQKQSE LERQLMDVMKSLDAAKDALVRERHEKQQLQEQLKKRNDEIADVHRKYRDLQNAMSKLKETNNKFHDRITKLQIENEQLRR SARERSSLQIELNEKQTQIMELKGTIEDQSKQITHQESLIDKKLNVVEQLALDHQKLADGQMKLEDIIRCQTDQISRLLS DKEDATHQLTIQQRQLSTQQASIAMMQEHLERLEMSMIAQSEQQNVLAICPQEPSNRNRRQPITTKPTFSRPFNVGKPEN SKNMHWKLAATTAKPK |
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