Gene
| Gene Model ID | pfu_aug2.0_132.1_07020 |
|---|---|
| Locus | scaffold132.1 : 437268 ... 469201 : + |
| To GenomeBrowser | scaffold132.1:437268..469201 |
| Genes list of scaffold | scaffold132.1 |
| Synonym | pfu_aug1.0_4187.1_16311 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_132.1_07020.t1 | 1 | 1 | Ion_trans_2 | 203 | 276 | 3.3e-13 | 49.1 | 2.4e-16 | 8.7e-13 | 47.7 |
| pfu_aug2.0_132.1_07020.t1 | 1 | 1 | BK_channel_a | 448 | 499 | 4.6e-08 | 32.9 | 8.8e-11 | 3.3e-07 | 30.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_132.1_07020.t1 | gi|676458802|ref|XP_009055095.1| | hypothetical protein LOTGIDRAFT_232492 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_132.1_07020.t1 | gi|676494884|ref|XP_009066709.1| | hypothetical protein LOTGIDRAFT_91677, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_132.1_07020.t1 | gi|641660771|ref|XP_008181615.1| | PREDICTED: potassium channel subfamily T member 2 isoform X3 [Acyrthosiphon pisum] | 0.0 |
| pfu_aug2.0_132.1_07020.t1 | gi|641660773|ref|XP_008181616.1| | PREDICTED: potassium channel subfamily T member 2 isoform X4 [Acyrthosiphon pisum] | 0.0 |
| pfu_aug2.0_132.1_07020.t1 | gi|641660769|ref|XP_008181614.1| | PREDICTED: potassium channel subfamily T member 2 isoform X2 [Acyrthosiphon pisum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_132.1_07020.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_132.1_07020.t1 atggctgcagacgtttgtgacggtatagacctgaaatggatgaatgaggattctggggaggaggacaatgctgtcagaat gcttccagataatcagtggacattagtgtgcttatgtgagccttgtggacttatagacctcttgattgccctcacctgac tcggaggtactgtctttgacatggttgtaaaggttgtgatgtgtctactgtacattggtcgggtcatgatagatgaatat gaggaatatgcttgtggaggtgttccttgtgatgaaaattccacgtttgtcaccccgaaaaacgaagacgacggcatggc attctcttctgctgaagtcaactgatatgaaacttattttcagggtaacagatgtgaatatttcacacagcctggatttt tcttggaattcacatgctcatttcctttcctaataactctgggttatcatgagatgctaaaagacctgtacgtaccatgc ttcctgaattgctggctggctaaaatggctctagagagattttttaatgatatacatatgagaggccagagatttcagac tatatcagtaaccatgtcccagcaacttttactcctcatagccactctgtgttgtctcatattcaccacggtatgtggca tacagcatatccagagagcgagctcagagaagcctctgaccatgtttgaatcgttttacttcgttatcgtgactttctct accgtcggctatggtgatatcagcccggacatctggctcggtcagctatttatggtgttgatgatctgtatagccattgc tttcattccaagacagatagagattatagcctccacatgggcagagaagaacagagctggtggggagtatggcagacgga cggccagaaaacaaaaacatgtcgttgtatgctctaaagtactcactgctgacgctatcatggatttcctgtcagaattc tacgctcatcctaaactagagcactatattgtgattttgctgagttccacagagttagacagtaacatgcagacaattct acgagatcctaaatgggctaacagagtcatattcatgagggggtcggcacttaaaaacgtggacctacggagatgcagaa tgaatgatgcagaagcatgttttatcttggcccctggtaactgttctaacaaagaccaggcagatcaacacaccattttg agatcgtgggccatcaaggatttctctccgtcctgtaaccaatacatacagattttcagagcagaaaacaaaatgcatgt caagtttgcagcaaaattagaaacagttgttcttcctattttcagtgacggaaaccttgcgtcagaatggatgaagttgt acggagcccactcgggtaatgagatctaccacatacaactcggcaagagtgtgttcttcaaggagtacgagggtaaatcg tttacggaagcatcgtgtgaggctcatgccatctatggagtaacattgatgggcgtcatggaggtaccagaatcagaaag ccttgcaaacaaacccaaactcctcctgaaccctggaccccagtatattctgaaagctacagacttctgcttctatctga gcttcactaaggaggaggagtacgtgtttaaaccggagaaaacaaaaataaagaaagaaaaacaggatagtcactcatca agagagcagagctacaaaaaaatggcggagaatttacatcgtataatggatgcccatttattggaggatgattttgacgg agaggagagtgtgtttaacacaataacatcacaagtcggagaggaatactctagggcagccaggagtctacatgtaccag acaccccagatgttctacagccaagtttagacgagtctgacgcctctcacagagtacatatcaccaaaaatcacctgtgg ttgtatgaagacatgggacatgaagagttcataaagggaccaccaccgacgtttcttactggttcgaggaagacaatttg ccatctggtcaagcaccggcgtaacgactgctgtttactatggggagagcaatgcagtcatgtgtcgtataaacatgtga atgacaacaggtggcagcaccagctgatcataatagccgcggagcagttttgccttggcttgtataactttatcattcca ctgcgatcagagttcatcagtatcaagtcccttagccccatcattataatgctggaaaatgatcctgatgacatattctt ggaaaccatagcccagtttcccatggtatactggatgaaaggaaaaatgaaaaatattgacgatcttatccgtgctggaa taaccaagtccagccatgtggttgtagttaatcgttcgtctaacatggatgtagaggaagtgctggttgactcggatacc atcgtagcagtacaaatggtcttcaagttatttccgcacaccaacattattactgagatttctaaaacgtccaacatgaa gttcatgcagttcgaaccccatgatgagtactcacagagaatagctagattggaaaagaaactgagtgagtctatgaagt ctagcttgacccacattttccgtttaccgtttgccgcgggtaatgttttcagtggttccatgcttgacacattactatac cagacgtttgtgaagggatacctgatcaagttcgtcagacttctgctgggaatagacgctgaacaaaactcagggcatct ctctagtatcaaggtaaagagagatattcagaggaagtaccgtacgtatggtgacctatataaagggctgtgttctgtta ccggggaagtccctatagctatttatagaacagaggtcagaaagcggactcctgatatggacgagactgaccaatcagat aataataacagaaccaaacataatgctaggatgttaaagaagacctccttcagcatgaagccgttttatgaacgagccga gcagaacgacatctccgatctgatcagaaatcggctaaaatctcaaagtatcgacacgtcgcattacagtaagtacacgt ag |
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Protein
| Protein ID | pfu_aug2.0_132.1_07020.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_132.1_07020.t1 MAADVCDGIDLKWMNEDSGEEDNAVRMLPDNQWTLVCLCEPCGLIDLLIALTXLGGTVFDMVVKVVMCLLYIGRVMIDEY EEYACGGVPCDENSTFVTPKNEDDGMAFSSAEVNXYETYFQGNRCEYFTQPGFFLEFTCSFPFLITLGYHEMLKDLYVPC FLNCWLAKMALERFFNDIHMRGQRFQTISVTMSQQLLLLIATLCCLIFTTVCGIQHIQRASSEKPLTMFESFYFVIVTFS TVGYGDISPDIWLGQLFMVLMICIAIAFIPRQIEIIASTWAEKNRAGGEYGRRTARKQKHVVVCSKVLTADAIMDFLSEF YAHPKLEHYIVILLSSTELDSNMQTILRDPKWANRVIFMRGSALKNVDLRRCRMNDAEACFILAPGNCSNKDQADQHTIL RSWAIKDFSPSCNQYIQIFRAENKMHVKFAAKLETVVLPIFSDGNLASEWMKLYGAHSGNEIYHIQLGKSVFFKEYEGKS FTEASCEAHAIYGVTLMGVMEVPESESLANKPKLLLNPGPQYILKATDFCFYLSFTKEEEYVFKPEKTKIKKEKQDSHSS REQSYKKMAENLHRIMDAHLLEDDFDGEESVFNTITSQVGEEYSRAARSLHVPDTPDVLQPSLDESDASHRVHITKNHLW LYEDMGHEEFIKGPPPTFLTGSRKTICHLVKHRRNDCCLLWGEQCSHVSYKHVNDNRWQHQLIIIAAEQFCLGLYNFIIP LRSEFISIKSLSPIIIMLENDPDDIFLETIAQFPMVYWMKGKMKNIDDLIRAGITKSSHVVVVNRSSNMDVEEVLVDSDT IVAVQMVFKLFPHTNIITEISKTSNMKFMQFEPHDEYSQRIARLEKKLSESMKSSLTHIFRLPFAAGNVFSGSMLDTLLY QTFVKGYLIKFVRLLLGIDAEQNSGHLSSIKVKRDIQRKYRTYGDLYKGLCSVTGEVPIAIYRTEVRKRTPDMDETDQSD NNNRTKHNARMLKKTSFSMKPFYERAEQNDISDLIRNRLKSQSIDTSHYSKYT |
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