Gene
| Gene Model ID | pfu_aug2.0_132.1_07021 |
|---|---|
| Locus | scaffold132.1 : 476864 ... 479450 : - |
| To GenomeBrowser | scaffold132.1:476864..479450 |
| Genes list of scaffold | scaffold132.1 |
| Synonym | pfu_aug1.0_43774.1_12532 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_132.1_07021.t1 | 4 | 1 | BLOC1_2 | 101 | 138 | 1.5e-07 | 31.4 | 0.001 | 0.3 | 11.2 |
| pfu_aug2.0_132.1_07021.t1 | 2 | 1 | Reo_sigmaC | 123 | 216 | 1.8e-06 | 27.3 | 1.4e-05 | 0.0041 | 16.3 |
| pfu_aug2.0_132.1_07021.t1 | 2 | 1 | HCR | 142 | 212 | 7.1e-09 | 34.2 | 1.0e-06 | 0.0003 | 18.9 |
| pfu_aug2.0_132.1_07021.t1 | 4 | 2 | BLOC1_2 | 146 | 206 | 1.5e-07 | 31.4 | 0.016 | 4.6 | 7.4 |
| pfu_aug2.0_132.1_07021.t1 | 2 | 1 | HAUS-augmin3 | 162 | 229 | 3.2e-06 | 26.5 | 3.4e-05 | 0.0099 | 15.0 |
| pfu_aug2.0_132.1_07021.t1 | 4 | 3 | BLOC1_2 | 339 | 376 | 1.5e-07 | 31.4 | 0.001 | 0.3 | 11.2 |
| pfu_aug2.0_132.1_07021.t1 | 2 | 2 | Reo_sigmaC | 361 | 453 | 1.8e-06 | 27.3 | 1.3e-05 | 0.0039 | 16.4 |
| pfu_aug2.0_132.1_07021.t1 | 2 | 2 | HCR | 380 | 449 | 7.1e-09 | 34.2 | 1.2e-06 | 0.00035 | 18.7 |
| pfu_aug2.0_132.1_07021.t1 | 4 | 4 | BLOC1_2 | 384 | 444 | 1.5e-07 | 31.4 | 0.016 | 4.6 | 7.4 |
| pfu_aug2.0_132.1_07021.t1 | 2 | 2 | HAUS-augmin3 | 400 | 466 | 3.2e-06 | 26.5 | 1.4e-05 | 0.0042 | 16.3 |
Transcript
| Transcript ID | pfu_aug2.0_132.1_07021.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_132.1_07021.t1 atgaaccccaaaaaatcgagaaaagacaaaaaacggaaaaaacaagctggtaatactagtggtgaaagtaaacaaaagat tcgtgtgggcgatcgtcaaggtgaagcattttggagcgatataacaatacccaggatctccaataccggtgttaacatgg agcaaaatttaatgcattcaacgcctcagggacattacgttaaatcacaatcacaatactcaccgtatgctatacaggca cctccgaactttaatggatatggctcacctatactacctgcgcctaatgggaataacggaactgatatacacaatatgat cagtgccctatccaggaaatttgacggcatgaacgctaaacttgagaaattggacttaattgaccaaagacttacacatt tggaaggtacgatgggttcagtgatcagaggtattaagtcgatgaaaacccagatgcaagacatggataaaagtctgaaa tttctaaatacgttatgtaaagataataccgaaactttgaagaaaactgaaaaatcagtgaaaattttgtcagatcaaac ttccaagttgcagaaggaacacgatgctactgtttctttggtcggtgagctgagcagtatggtgcacgatcttaaggaga aacaccttgatttacaagccaggtctatgcgagaaaacctggtatttgatggtattgcggaaacaaggggtactatgaac cccaaaaaatcgagaaaagacaaaaaacggaaaaaacaagctggtaatactagtggtgaaagtaaacaaaagattcgtgt gggcgatcgtcaaggtgaagcattttggagcgatataacaatacccaggatctccaataccggtgttaacatggagcaaa atttaatgcattcaacgcctcagggacattacgttaaatcacaatcacaatactcaccgtatgctatacaggcacctccg aactttaatggatatggctcacctatactacctgcgcctaatgggaataacggaactgatatacacaatatgatcagtgc cctatccaggaaatttgacggcatgaacgctaaacttgagaaattggacttaattgaccaaagacttacacatttggaag gtacgatgggttcagtgatcagaggtattaagtcgatgaaaacccagatgcaagacatggataaaagtctgaaatttcta aatacgttatgtaaagataataccgaaactttgaagaaaactgaaaaatcagtgaaaattttgtcagatcaaacttccaa gttgcagaaggaacacgatgctactgtttctttggtcggtgagctgagcagtatggtgcacgatcttaaggagaaacacc ttgatttacaagccaggtctatgcgagaaaacctggtatttgatggtattgcggaaacaagtgattag |
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Protein
| Protein ID | pfu_aug2.0_132.1_07021.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_132.1_07021.t1 MNPKKSRKDKKRKKQAGNTSGESKQKIRVGDRQGEAFWSDITIPRISNTGVNMEQNLMHSTPQGHYVKSQSQYSPYAIQA PPNFNGYGSPILPAPNGNNGTDIHNMISALSRKFDGMNAKLEKLDLIDQRLTHLEGTMGSVIRGIKSMKTQMQDMDKSLK FLNTLCKDNTETLKKTEKSVKILSDQTSKLQKEHDATVSLVGELSSMVHDLKEKHLDLQARSMRENLVFDGIAETRGTMN PKKSRKDKKRKKQAGNTSGESKQKIRVGDRQGEAFWSDITIPRISNTGVNMEQNLMHSTPQGHYVKSQSQYSPYAIQAPP NFNGYGSPILPAPNGNNGTDIHNMISALSRKFDGMNAKLEKLDLIDQRLTHLEGTMGSVIRGIKSMKTQMQDMDKSLKFL NTLCKDNTETLKKTEKSVKILSDQTSKLQKEHDATVSLVGELSSMVHDLKEKHLDLQARSMRENLVFDGIAETSD |
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