Gene
| Gene Model ID | pfu_aug2.0_1321.1_04960 |
|---|---|
| Locus | scaffold1321.1 : 12590 ... 32765 : - |
| To GenomeBrowser | scaffold1321.1:12590..32765 |
| Genes list of scaffold | scaffold1321.1 |
| Synonym | pfu_aug1.0_10840.1_60817 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1321.1_04960.t1 | 5 | 1 | TPR_11 | 230 | 255 | 6.5e-14 | 51.3 | 0.02 | 29.0 | 4.4 |
| pfu_aug2.0_1321.1_04960.t1 | 6 | 1 | TPR_2 | 232 | 255 | 6.7e-11 | 41.2 | 0.29 | 430.0 | 1.2 |
| pfu_aug2.0_1321.1_04960.t1 | 7 | 1 | TPR_12 | 243 | 260 | 2.2e-07 | 30.7 | 0.68 | 1000.0 | -0.3 |
| pfu_aug2.0_1321.1_04960.t1 | 7 | 1 | TPR_8 | 244 | 259 | 6.3e-11 | 41.2 | 0.47 | 700.0 | 0.4 |
| pfu_aug2.0_1321.1_04960.t1 | 5 | 1 | TPR_1 | 244 | 255 | 3.6e-08 | 32.6 | 1.4 | 2000.0 | -1.4 |
| pfu_aug2.0_1321.1_04960.t1 | 6 | 1 | TPR_14 | 437 | 461 | 7.0e-06 | 26.2 | 0.37 | 550.0 | 1.6 |
| pfu_aug2.0_1321.1_04960.t1 | 7 | 2 | TPR_12 | 440 | 460 | 2.2e-07 | 30.7 | 0.85 | 1300.0 | -0.6 |
| pfu_aug2.0_1321.1_04960.t1 | 6 | 2 | TPR_2 | 459 | 472 | 6.7e-11 | 41.2 | 0.39 | 580.0 | 0.8 |
| pfu_aug2.0_1321.1_04960.t1 | 5 | 2 | TPR_1 | 461 | 472 | 3.6e-08 | 32.6 | 0.028 | 41.0 | 4.0 |
| pfu_aug2.0_1321.1_04960.t1 | 3 | 1 | TPR_19 | 462 | 489 | 6.1e-07 | 29.6 | 0.24 | 350.0 | 1.6 |
| pfu_aug2.0_1321.1_04960.t1 | 6 | 2 | TPR_14 | 462 | 501 | 7.0e-06 | 26.2 | 0.024 | 35.0 | 5.4 |
| pfu_aug2.0_1321.1_04960.t1 | 5 | 2 | TPR_11 | 465 | 516 | 6.5e-14 | 51.3 | 0.01 | 15.0 | 5.3 |
| pfu_aug2.0_1321.1_04960.t1 | 7 | 3 | TPR_12 | 468 | 491 | 2.2e-07 | 30.7 | 0.022 | 33.0 | 4.5 |
| pfu_aug2.0_1321.1_04960.t1 | 7 | 2 | TPR_8 | 469 | 491 | 6.3e-11 | 41.2 | 0.0039 | 5.7 | 6.9 |
| pfu_aug2.0_1321.1_04960.t1 | 7 | 3 | TPR_8 | 500 | 518 | 6.3e-11 | 41.2 | 1.7 | 2600.0 | -1.4 |
| pfu_aug2.0_1321.1_04960.t1 | 7 | 4 | TPR_12 | 501 | 551 | 2.2e-07 | 30.7 | 0.0028 | 4.2 | 7.3 |
| pfu_aug2.0_1321.1_04960.t1 | 3 | 2 | TPR_19 | 508 | 539 | 6.1e-07 | 29.6 | 8.3 | 12000.0 | -3.4 |
| pfu_aug2.0_1321.1_04960.t1 | 5 | 3 | TPR_11 | 522 | 553 | 6.5e-14 | 51.3 | 0.00034 | 0.51 | 10.0 |
| pfu_aug2.0_1321.1_04960.t1 | 6 | 3 | TPR_2 | 522 | 552 | 6.7e-11 | 41.2 | 5.7e-05 | 0.085 | 12.8 |
| pfu_aug2.0_1321.1_04960.t1 | 5 | 3 | TPR_1 | 522 | 552 | 3.6e-08 | 32.6 | 2.9e-05 | 0.043 | 13.4 |
| pfu_aug2.0_1321.1_04960.t1 | 6 | 3 | TPR_14 | 523 | 545 | 7.0e-06 | 26.2 | 9.1 | 14000.0 | -2.7 |
| pfu_aug2.0_1321.1_04960.t1 | 7 | 4 | TPR_8 | 524 | 551 | 6.3e-11 | 41.2 | 0.0059 | 8.8 | 6.3 |
| pfu_aug2.0_1321.1_04960.t1 | 7 | 5 | TPR_8 | 557 | 587 | 6.3e-11 | 41.2 | 0.014 | 21.0 | 5.2 |
| pfu_aug2.0_1321.1_04960.t1 | 5 | 4 | TPR_11 | 558 | 619 | 6.5e-14 | 51.3 | 1.9e-10 | 2.8e-07 | 30.0 |
| pfu_aug2.0_1321.1_04960.t1 | 6 | 4 | TPR_2 | 558 | 587 | 6.7e-11 | 41.2 | 0.00062 | 0.92 | 9.5 |
| pfu_aug2.0_1321.1_04960.t1 | 7 | 5 | TPR_12 | 559 | 618 | 2.2e-07 | 30.7 | 0.00021 | 0.32 | 10.9 |
| pfu_aug2.0_1321.1_04960.t1 | 6 | 4 | TPR_14 | 559 | 596 | 7.0e-06 | 26.2 | 0.00084 | 1.2 | 9.9 |
| pfu_aug2.0_1321.1_04960.t1 | 5 | 4 | TPR_1 | 563 | 585 | 3.6e-08 | 32.6 | 0.083 | 120.0 | 2.4 |
| pfu_aug2.0_1321.1_04960.t1 | 3 | 3 | TPR_19 | 566 | 623 | 6.1e-07 | 29.6 | 3.5e-08 | 5.2e-05 | 23.4 |
| pfu_aug2.0_1321.1_04960.t1 | 6 | 5 | TPR_14 | 590 | 630 | 7.0e-06 | 26.2 | 0.0045 | 6.7 | 7.6 |
| pfu_aug2.0_1321.1_04960.t1 | 7 | 6 | TPR_8 | 591 | 621 | 6.3e-11 | 41.2 | 1.3e-06 | 0.002 | 17.8 |
| pfu_aug2.0_1321.1_04960.t1 | 6 | 5 | TPR_2 | 591 | 621 | 6.7e-11 | 41.2 | 1.3e-05 | 0.02 | 14.7 |
| pfu_aug2.0_1321.1_04960.t1 | 5 | 5 | TPR_1 | 591 | 620 | 3.6e-08 | 32.6 | 0.00019 | 0.28 | 10.8 |
| pfu_aug2.0_1321.1_04960.t1 | 6 | 6 | TPR_14 | 625 | 651 | 7.0e-06 | 26.2 | 1.3 | 1900.0 | -0.1 |
| pfu_aug2.0_1321.1_04960.t1 | 7 | 6 | TPR_12 | 629 | 659 | 2.2e-07 | 30.7 | 1.2 | 1800.0 | -1.1 |
| pfu_aug2.0_1321.1_04960.t1 | 7 | 7 | TPR_8 | 636 | 654 | 6.3e-11 | 41.2 | 7.2 | 11000.0 | -3.3 |
| pfu_aug2.0_1321.1_04960.t1 | 5 | 5 | TPR_11 | 638 | 655 | 6.5e-14 | 51.3 | 2.8 | 4200.0 | -2.6 |
| pfu_aug2.0_1321.1_04960.t1 | 6 | 6 | TPR_2 | 638 | 653 | 6.7e-11 | 41.2 | 6.6 | 9800.0 | -3.0 |
| pfu_aug2.0_1321.1_04960.t1 | 7 | 7 | TPR_12 | 748 | 767 | 2.2e-07 | 30.7 | 2.6 | 3800.0 | -2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1321.1_04960.t1 | gi|676478962|ref|XP_009061592.1| | hypothetical protein LOTGIDRAFT_234941 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1321.1_04960.t1 | gi|478487640|ref|XP_004418212.1| | PREDICTED: tetratricopeptide repeat protein 27 [Ceratotherium simum simum] | 0.0 |
| pfu_aug2.0_1321.1_04960.t1 | gi|602731215|ref|XP_007451013.1| | PREDICTED: tetratricopeptide repeat protein 27 [Lipotes vexillifer] | 0.0 |
| pfu_aug2.0_1321.1_04960.t1 | gi|466000327|ref|XP_004268250.1| | PREDICTED: tetratricopeptide repeat protein 27 [Orcinus orca] | 0.0 |
| pfu_aug2.0_1321.1_04960.t1 | gi|657532680|ref|XP_008305052.1| | PREDICTED: tetratricopeptide repeat protein 27 isoform X1 [Stegastes partitus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1321.1_04960.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1321.1_04960.t1 atggaagacaaactacaagacatttttaatgttgaaaaagaaataatttctaaaagtataacccgcttaccagaaaatag tggcctgttacagaagtctgtagtgctgacaaattctgttaatggagactgggaagcagtgttgaagacacctgaagcta atgatattttagggcagaatcccaatgctgggactgatttaggtttaatcatacaggaaaatgtccaacgagcgatagat cagagtgatgacatagaattaagacagctagaggtgttagcagttggagcagcatgtttacagatgtttgtacagaacaa ctggctgggaccgctaagtcacggagaggccaaggatctcctaccgcaaggattctctgacccagaaaagtacaaggcct tgatcagccacatacaaacagaactgagctgtgacggtgaatccatatatgaactctgtataggaatagagtatctctac atggctagatgtatactgctcaactgtcatcagcatctgacaggattacagaccagtgaatggtggttgattcattgtat aaatgttcatcagcagattctagatgatagatctcctacacttaaagagaaaaccatggaacttatagacagtgttgcaa agaaagaagcacttacaacagatgacaagaacagggacctatccattcagtttcatttagaggcaggttatatgtgttat acatactatgaatacaagaaagctgatgagcatttcaacacggcacagggactggctaaattacagatagagctgacagg tgtcatggggaaaagaactcgatttcaagaagaagacaaagctcagctggtactaagtgtaaagagagagtcaccaatgt ctgtcagtagagaggaaaacgtcaaaactgaactaccaaagatagtaaaactggatgatgatacagttctggatgagatt gagctatcagagaaatcccaggacctctgtccagatttatctgcccttgaacaagctgtaataattggtgcaatggagaa caaaatcagaagtcaggcaagtcaagataagctaacagaagaggaggctatggcgtatattgattgtatgctgtcacaag ctaagtgctggtcagttgttgtcgctgcagtactcaagaggtcagttttacagaaaacaagaagacggactgtagagagg tcaatgatgcagttagaggagctgattaaccagatacctaactctaacataccgttcacacagagatcatatttatttta caccgttagaatgaagcctgtatggaatattcagaaacagttggcagagctgtttttaagtataggggttgtagccagtg cattggaagtgtttgagagactagaactatgggaggatgccatccaatgttataaaacaatgggtaaaatggaaaaggca gaaaccgttataagggaacaattggccatcaaagagacccctaatctatggtgcttcctaggagatgttacaagtgaaat atcacactaccagaaagcatgggagatgtctaatcatcgcagtgccagggcacagagatgtatgggttatgtgtacttcg gtcaattggattataagaagagtatggaatgttttgagctgtcactgaaagttaattccctgcagatacctgtgtggtat gtgtatggttgtgttgctttagccgcggaggattttaccacagctatgaaggcgtttaaaagatgtgtcaatttagaaac tgataatttcgaggcttggaataatttatctattgcctacataaagctgaaggataagcccaaggcatatgtaacactta aagaagccattaagtgtaactatggaaactggagactttgggagaatttattaattatagccacagatgttggtgaattt caggattccatcctgtcgtacaacagattgatggatctgaaagaaaaatggacggatgaaaaagcactagaaatactggt agcggctgtaacgggaggatatgatgattctaagggacatccagcatctaggtatagcaacaaactactagaactgtttg gcaggattacagcaaaggtgacaggtagtggaaagatttggaatctgtacgccaagttaacaactgctgtcaaaaagcca tcacctgaagtctcacaaatggttttacagttcctacagaaatcacataggtgtgacacacaggacacaaactggcaaaa ggatgtggataagtgtaaaaatgttggagaggaatcaatacacttagctgatacatatatacaaagttgtgagaaggaat cgtctaaagatcaagccttacaaatgatgtcctcagccaaactaatgatgaaaggtgtcattacaaagatcaagcaagag catacagatgttataacagagagtgtgaatgaagcagttgtgcctgtgctagaatcactgaacagtaaattccaagaaat tatggacaaaattacagagcttaaaggaagttga |
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Protein
| Protein ID | pfu_aug2.0_1321.1_04960.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1321.1_04960.t1 MEDKLQDIFNVEKEIISKSITRLPENSGLLQKSVVLTNSVNGDWEAVLKTPEANDILGQNPNAGTDLGLIIQENVQRAID QSDDIELRQLEVLAVGAACLQMFVQNNWLGPLSHGEAKDLLPQGFSDPEKYKALISHIQTELSCDGESIYELCIGIEYLY MARCILLNCHQHLTGLQTSEWWLIHCINVHQQILDDRSPTLKEKTMELIDSVAKKEALTTDDKNRDLSIQFHLEAGYMCY TYYEYKKADEHFNTAQGLAKLQIELTGVMGKRTRFQEEDKAQLVLSVKRESPMSVSREENVKTELPKIVKLDDDTVLDEI ELSEKSQDLCPDLSALEQAVIIGAMENKIRSQASQDKLTEEEAMAYIDCMLSQAKCWSVVVAAVLKRSVLQKTRRRTVER SMMQLEELINQIPNSNIPFTQRSYLFYTVRMKPVWNIQKQLAELFLSIGVVASALEVFERLELWEDAIQCYKTMGKMEKA ETVIREQLAIKETPNLWCFLGDVTSEISHYQKAWEMSNHRSARAQRCMGYVYFGQLDYKKSMECFELSLKVNSLQIPVWY VYGCVALAAEDFTTAMKAFKRCVNLETDNFEAWNNLSIAYIKLKDKPKAYVTLKEAIKCNYGNWRLWENLLIIATDVGEF QDSILSYNRLMDLKEKWTDEKALEILVAAVTGGYDDSKGHPASRYSNKLLELFGRITAKVTGSGKIWNLYAKLTTAVKKP SPEVSQMVLQFLQKSHRCDTQDTNWQKDVDKCKNVGEESIHLADTYIQSCEKESSKDQALQMMSSAKLMMKGVITKIKQE HTDVITESVNEAVVPVLESLNSKFQEIMDKITELKGS |
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