Gene
| Gene Model ID | pfu_aug2.0_1323.1_11592 |
|---|---|
| Locus | scaffold1323.1 : 80026 ... 91070 : + |
| To GenomeBrowser | scaffold1323.1:80026..91070 |
| Genes list of scaffold | scaffold1323.1 |
| Synonym | pfu_aug1.0_5731.1_67307 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 39s ribosomal protein mitochondrial | GO:0030529 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1323.1_11592.t1 | 1 | 1 | Ribosomal_L14 | 332 | 447 | 3.2e-22 | 78.5 | 8.4e-26 | 6.2e-22 | 77.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1323.1_11592.t1 | gi|524888781|ref|XP_005100955.1| | PREDICTED: 39S ribosomal protein L14, mitochondrial-like isoform X1 [Aplysia californica] | 9.99967e-42 |
| pfu_aug2.0_1323.1_11592.t1 | gi|675865384|ref|XP_009018252.1| | hypothetical protein HELRODRAFT_173394 [Helobdella robusta] | 1.0e-39 |
| pfu_aug2.0_1323.1_11592.t1 | gi|170043537|ref|XP_001849440.1| | 39S ribosomal protein L14, mitochondrial [Culex quinquefasciatus] | 3.0e-39 |
| pfu_aug2.0_1323.1_11592.t1 | gi|642919175|ref|XP_967659.3| | PREDICTED: 39S ribosomal protein L14, mitochondrial [Tribolium castaneum] | 3.0e-38 |
| pfu_aug2.0_1323.1_11592.t1 | gi|746830066|ref|XP_011050438.1| | PREDICTED: 39S ribosomal protein L14, mitochondrial [Acromyrmex echinatior] | 3.0e-38 |
Transcript
| Transcript ID | pfu_aug2.0_1323.1_11592.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1323.1_11592.t1 atgccacgaaaaagacgccagaagagaatcagcatgttggacaaatatacgctaagatgtttgcgaatcaagcgatgtga tgcctttttaaatcgtgatgatcacagttacgcagcaaaagaaattataataacacaagaaaatgatcatgatgatagtc tggtacttgttaaaaatgatgaggattatgatgaaaattctacggaggactatgaacaaagtccagaaacaagccatacg cctagtgcgatagaacaaagtccagaaacaagctatacgcccaatgcaatagaacaaagtcaagaaacaagccatacgcc tagtgcgacagatgatgtcatttatgttccagaaataggcgaaacagttgatatttcaacatctttatcaccctatcagc agctgcgggtagagttactcttagctatagagcgaaatcccgaggaacaatttcaggatctgattccaataccatctgac cttgactataactcttcacaagagcttatcgctttccgggaaagtgacttcggagcagttaatggttctgaaatgtataa ctcaactatacggacgtttcaatgcgctttgctggtgcaaggaagacgatgcagtcactgtagcacgtacagaaggtcct tatttagtcgccttcatcgtctggagaaaaaggacaataacaaatccaggattgggagaggaatgaaacacaataacttc agacatgacgatttcgttcgaaagatcaacgaacaaaaagaaaagatcaagagtttggagactgaaatgaataaaatgag acaacagtattatcgtgacttgaagtcaaaaggaattttaatggacaagaatataaataagcaggacataagagctaggg aaatggagatattacagagaacattacctacggttcacaggattctgaatccagcgttcagggcgacaagtcgcactgga aacttcagtaccaccgcaccactgtttgaattgcgcctcctctctcaagttaatgtagttgacaatagtaaaataggccg tacggccgctgccacgggtcggcccgtgaagatcatccatgtgtacaataaaactggtgtggccaaattgggggacaaag tgcttgtggctattgaaagagaaaagagaaaaggatatattgtaggatgtaaacagagacaaaatcctatggtgcctaag tttgatgctaataacatagtgctaatagacgatggcggacttcccctagggacgcgtatcaaagtacccgtgccatcagc tttaaggaagcgcgccacacccgaattcttgaaagtgttatctctagcacctagattcatttaa |
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Protein
| Protein ID | pfu_aug2.0_1323.1_11592.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1323.1_11592.t1 MPRKRRQKRISMLDKYTLRCLRIKRCDAFLNRDDHSYAAKEIIITQENDHDDSLVLVKNDEDYDENSTEDYEQSPETSHT PSAIEQSPETSYTPNAIEQSQETSHTPSATDDVIYVPEIGETVDISTSLSPYQQLRVELLLAIERNPEEQFQDLIPIPSD LDYNSSQELIAFRESDFGAVNGSEMYNSTIRTFQCALLVQGRRCSHCSTYRRSLFSRLHRLEKKDNNKSRIGRGMKHNNF RHDDFVRKINEQKEKIKSLETEMNKMRQQYYRDLKSKGILMDKNINKQDIRAREMEILQRTLPTVHRILNPAFRATSRTG NFSTTAPLFELRLLSQVNVVDNSKIGRTAAATGRPVKIIHVYNKTGVAKLGDKVLVAIEREKRKGYIVGCKQRQNPMVPK FDANNIVLIDDGGLPLGTRIKVPVPSALRKRATPEFLKVLSLAPRFI |
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