Gene
| Gene Model ID | pfu_aug2.0_1323.1_11593 |
|---|---|
| Locus | scaffold1323.1 : 97299 ... 100875 : - |
| To GenomeBrowser | scaffold1323.1:97299..100875 |
| Genes list of scaffold | scaffold1323.1 |
| Synonym | pfu_aug1.0_2397.1_66306 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable g-protein coupled receptor 75 | GO:0044763 GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1323.1_11593.t1 | 2 | 1 | 7tm_1 | 42 | 53 | 2.8e-30 | 105.3 | 2.9 | 8600.0 | -4.5 |
| pfu_aug2.0_1323.1_11593.t1 | 1 | 1 | 7TM_GPCR_Srsx | 56 | 235 | 1.5e-07 | 30.8 | 9.1e-11 | 2.7e-07 | 30.0 |
| pfu_aug2.0_1323.1_11593.t1 | 2 | 2 | 7tm_1 | 61 | 346 | 2.8e-30 | 105.3 | 9.3e-34 | 2.8e-30 | 105.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1323.1_11593.t1 | gi|676435848|ref|XP_009047690.1| | hypothetical protein LOTGIDRAFT_238221 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1323.1_11593.t1 | gi|524880733|ref|XP_005097027.1| | PREDICTED: D(3) dopamine receptor-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1323.1_11593.t1 | gi|556954748|ref|XP_005988978.1| | PREDICTED: probable G-protein coupled receptor 75-like [Latimeria chalumnae] | 8.0e-34 |
| pfu_aug2.0_1323.1_11593.t1 | gi|512843647|ref|XP_004914801.1| | PREDICTED: probable G-protein coupled receptor 75 [Xenopus (Silurana) tropicalis] | 3.0e-33 |
| pfu_aug2.0_1323.1_11593.t1 | gi|148234720|ref|NP_001084920.1| | probable G-protein coupled receptor 75 [Xenopus laevis] | 4.0e-33 |
Transcript
| Transcript ID | pfu_aug2.0_1323.1_11593.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1323.1_11593.t1 atgcactatccaacgatcataatacccatggacagaattcattcgcccttagagaactgcagcgatacgagagacagttc aggagacggagaacgccatgttttctacggcagggtccacattgcgtcactggccgtatgtactgttcttatattcttcg ccatacttttgggatgcataggaaacggcattgtattattttctgcttttaaatggaggaaattacggacaaacttcgac gttttagtcattaatttgacgggtgctgattttataacttgtacctgccttactccgatttttcttatattgttattcgt tgatccaccaacgccaaaaatattttgcgggagtatcttatttttgggaacaatcagtgcaatgttgtcgttgttaactc ttgtcgcaattgcgcttcacagacttgcacgcgtcgttgggcatgcgcgagggacaacaagtttgactcgtatcggaatc atcatagttctcatatggatcgtcagtttagtattgtctatcggcgggacatttcatatgaccacagactgggacgatag ctttaaaaactgccagcctatcattaacagtcctaatccggcaatgcagaactttgttctttatttcctggcaccagtca ctattgtaagcttctctataataactttatcatatataattatagcatgggtagtacaaaaacaggtgaactcagcgagt gaaaataacagtccaaggtgctcgtccccaagggaaaatatgtacagacaatgtagggatttaattggcgacaagaggaa gatgtgtagtccgaccagacccagtgtttcctgtgccagtcaaaatctcctgaacaaagactctaaagccgtaacaatgt gcttggtggtgattctcaccatgggactctgttggggaccactaattatgtcacaatttatagaattggccactggcgaa tcaattatattgtatcaggtgaaattatgcggaatcggtcttgttttcctcaatagtgctctcgacccatatatttatgc ccaacacatcggaaaaatgaaacaaaaatacaccaaactgtttaaaattttagtcaagtgttgtgtacgtaaagaccgaa cgtccagattacacagttttgcacagaggaatgcaaatttctatcggtcacgttcacttcattacgatttcgaatcgaac agtgtccccgcaaaaacgtcaacaaacattaaaaagattttggacaaatgtgtgggtagttctcgcggccctgcctctaa tttctacagacaaaatcttttaattaacacagaccttaaatacaaaacatcagaatgtgttcagtctaaaacgactttaa aacagaaagcaccgtgtaactttagtgactacagtatgatagcggaggacgccaatggcataatcaatgcgtcatgtagc caagggacgccaaaagacgggcaaagttggacggaggatcaacttaatatattgccaaataagtga |
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Protein
| Protein ID | pfu_aug2.0_1323.1_11593.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1323.1_11593.t1 MHYPTIIIPMDRIHSPLENCSDTRDSSGDGERHVFYGRVHIASLAVCTVLIFFAILLGCIGNGIVLFSAFKWRKLRTNFD VLVINLTGADFITCTCLTPIFLILLFVDPPTPKIFCGSILFLGTISAMLSLLTLVAIALHRLARVVGHARGTTSLTRIGI IIVLIWIVSLVLSIGGTFHMTTDWDDSFKNCQPIINSPNPAMQNFVLYFLAPVTIVSFSIITLSYIIIAWVVQKQVNSAS ENNSPRCSSPRENMYRQCRDLIGDKRKMCSPTRPSVSCASQNLLNKDSKAVTMCLVVILTMGLCWGPLIMSQFIELATGE SIILYQVKLCGIGLVFLNSALDPYIYAQHIGKMKQKYTKLFKILVKCCVRKDRTSRLHSFAQRNANFYRSRSLHYDFESN SVPAKTSTNIKKILDKCVGSSRGPASNFYRQNLLINTDLKYKTSECVQSKTTLKQKAPCNFSDYSMIAEDANGIINASCS QGTPKDGQSWTEDQLNILPNK |
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