Gene
| Gene Model ID | pfu_aug2.0_1323.1_11596 |
|---|---|
| Locus | scaffold1323.1 : 142498 ... 149155 : - |
| To GenomeBrowser | scaffold1323.1:142498..149155 |
| Genes list of scaffold | scaffold1323.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transmembrane protein 229b | GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1323.1_11596.t1 | 1 | 1 | DUF1113 | 16 | 130 | 1.4e-08 | 34.6 | 1.2e-12 | 1.7e-08 | 34.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1323.1_11596.t1 | gi|675860984|ref|XP_009016052.1| | hypothetical protein HELRODRAFT_64291 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_1323.1_11596.t1 | gi|524899345|ref|XP_005106105.1| | PREDICTED: transmembrane protein 229B-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1323.1_11596.t1 | gi|676465631|ref|XP_009057306.1| | hypothetical protein LOTGIDRAFT_217156 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1323.1_11596.t1 | gi|585655075|ref|XP_006884823.1| | PREDICTED: transmembrane protein 229B [Elephantulus edwardii] | 0.0 |
| pfu_aug2.0_1323.1_11596.t1 | gi|32698890|ref|NP_872332.1| | transmembrane protein 229B [Homo sapiens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1323.1_11596.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1323.1_11596.t1 atgacaaaccaaagaaatgaagaaaaatatcaaccaatatccataatatggagactatatatttatgccatacatggata tgcatgtgagatcatgtttactgcattatgggagtttgttgtcaatttgaactggaagcttccaggcgttacgagtgtgt gggtactacctatatatggattgtccgggctggtcatagagaggatgtacctagccatgaaggacacggtgccacagcta ctgagaatcattatatacacactgtggacgtactgctgggagtttagtacgggatttgtactgaagcagtttggtgcatg tccctgggattacaccccctttcacggtgatttcatgggacttattacattggagtatgctccactgtggtttatnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntggtaa |
|
Protein
| Protein ID | pfu_aug2.0_1323.1_11596.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1323.1_11596.t1 MTNQRNEEKYQPISIIWRLYIYAIHGYACEIMFTALWEFVVNLNWKLPGVTSVWVLPIYGLSGLVIERMYLAMKDTVPQL LRIIIYTLWTYCWEFSTGFVLKQFGACPWDYTPFHGDFMGLITLEYAPLWFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXW |
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