Gene
| Gene Model ID | pfu_aug2.0_1323.1_11597 |
|---|---|
| Locus | scaffold1323.1 : 150898 ... 163695 : - |
| To GenomeBrowser | scaffold1323.1:150898..163695 |
| Genes list of scaffold | scaffold1323.1 |
| Synonym | pfu_aug1.0_2397.1_66302 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1323.1_11597.t1 | 1 | 1 | Ribosomal_S5_C | 31 | 100 | 5.8e-13 | 47.9 | 1.2e-16 | 9.3e-13 | 47.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1323.1_11597.t1 | gi|524888699|ref|XP_005100916.1| | PREDICTED: 28S ribosomal protein S5, mitochondrial-like [Aplysia californica] | 2.94273e-44 |
| pfu_aug2.0_1323.1_11597.t1 | gi|752895573|ref|XP_011266015.1| | PREDICTED: 28S ribosomal protein S5, mitochondrial [Camponotus floridanus] | 3.0e-37 |
| pfu_aug2.0_1323.1_11597.t1 | gi|665811284|ref|XP_008554102.1| | PREDICTED: 28S ribosomal protein S5, mitochondrial [Microplitis demolitor] | 2.0e-36 |
| pfu_aug2.0_1323.1_11597.t1 | gi|380025345|ref|XP_003696435.1| | 4.0e-36 | |
| pfu_aug2.0_1323.1_11597.t1 | gi|340714672|ref|XP_003395850.1| | PREDICTED: putative 28S ribosomal protein S5, mitochondrial [Bombus terrestris] | 1.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_1323.1_11597.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1323.1_11597.t1 atggtgtcggaggctaaattgagagcttttaatcgactgtactttgttgaaagatataatggacacacaatattccacga tttttatgtacaagaacataagacaaaacttacagtacaaagacagagcaaaggatttggtgttgttggtagcttagtta taaaagacctttgttatctcctgggaataaaggatatatatgtgaagactgaaggtgccaggaagaactatagacatgtt gtaagaggattctttgaaggccttttagatcaggaaacacatcaacagctagcagataggaccaatttatacgttgtgga agtccgggatgatagaggaaactttcccgtcgttgtagcctcaccatctggggatgaagttagagaagctctacaagggg atgaggacgaatggctaaatgttgattctatgtatagtggagggaaaattaaactcaaaacaaaacgaaaagttcctatg tatgaactgaacaattatccatcatggcagaggcgctgtcaagctgttgaaaaacgacgagggcagtttgaagcaagatg ggaaagatacgcgtcagggctagaaccttctgaggaagagcttaaggaaagatttgtgcctaaacctaaaaacaattaa |
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Protein
| Protein ID | pfu_aug2.0_1323.1_11597.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1323.1_11597.t1 MVSEAKLRAFNRLYFVERYNGHTIFHDFYVQEHKTKLTVQRQSKGFGVVGSLVIKDLCYLLGIKDIYVKTEGARKNYRHV VRGFFEGLLDQETHQQLADRTNLYVVEVRDDRGNFPVVVASPSGDEVREALQGDEDEWLNVDSMYSGGKIKLKTKRKVPM YELNNYPSWQRRCQAVEKRRGQFEARWERYASGLEPSEEELKERFVPKPKNN |
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