Gene
| Gene Model ID | pfu_aug2.0_1325.1_18266 |
|---|---|
| Locus | scaffold1325.1 : 1 ... 36815 : - |
| To GenomeBrowser | scaffold1325.1:1..36815 |
| Genes list of scaffold | scaffold1325.1 |
| Synonym | pfu_aug1.0_4660.1_44995 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1325.1_18266.t1 | 1 | 1 | RVT_1 | 273 | 389 | 1.1e-08 | 34.7 | 8.6e-12 | 2.6e-08 | 33.5 |
| pfu_aug2.0_1325.1_18266.t1 | 2 | 1 | Sulfotransfer_1 | 1301 | 1423 | 7.8e-27 | 94.1 | 7.3e-23 | 2.2e-19 | 69.7 |
| pfu_aug2.0_1325.1_18266.t1 | 2 | 2 | Sulfotransfer_1 | 1427 | 1477 | 7.8e-27 | 94.1 | 3.1e-08 | 9.3e-05 | 21.8 |
| pfu_aug2.0_1325.1_18266.t1 | 1 | 1 | BRE | 1504 | 1595 | 5.2e-10 | 38.8 | 3.4e-13 | 1.0e-09 | 37.9 |
Transcript
| Transcript ID | pfu_aug2.0_1325.1_18266.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1325.1_18266.t1 atgtccaagaggagatccacagagtctccaagacggccagaaagtgaggtaactatgacttggtcagatcaggaactttc agctaggcagcagacagattacgatagttcaggatcactggaaacgaacaactgtggagtccaagggcagataactcaga ttcaaccacatgctgtacataagatgccatttgctactgatccagctgtatccagcttccaacatggacagataactcca atgtccgcatccaacttccaacatgggcagataactccaacatcagtatccagcttccaacattggcagataactctaat gtctgcatccaacttccaacatgggcagataactccaatgtctgtatccaactttcagcaggataaattaactccaaaat tagacagtaaaaacacaacgcggaacaaagatcaccggactacacctgtaaggagaatcaaactagaaagaaacctgtgt aaagacaagaaattgttgaccagtgatgccgaattaccaacacatttactgaaattatatgacgatgcaggacctacaag ttctgatcatgagaagagagaaattgctcagttgcttttacgcaaccaacatgtattttcagagcatgagtttgaccttg gatttactcctcttggggaacatgccattgatacaggtgtacacaaacctgtaaaacagcccccaagacgtgtaccacat gctatggctaatgaagaaaaagagagcattgagaaacttgatgaacaaggaattattaagaaatccacttcaccattggc ttcacctgtagttttagtgcgtaagaagtcaggtggtttacgagtgtgtatagattataggaaactcaatgctcttaccc ttaaggatgcctttccactaccccgcattcaagattatcttgatgttgtttctggtgcttgcttgttttcaacttttgac ctgacaagcggctatcaccaagtacctgtaaaacaaagtgatcaagctaaaactgcatttgtaacaaagtatgggctata tgaatacacgtctatgcctttcagcttgacgaacgcgcctgtcacatttcaaagaatcatggaaatagcactaagtggtt tacagtgggtaacatgtcttatctacttagatgatgtggtatgttttaatgaggtttgttttctgggccacattgtcaac aaaaatggtgtgaaaccaaatcctgataacacagtgaagatacaaaattggccaacgcccaagactgttaccgaggttcg ccaatttcttggaatggcttcttataaccgtcgctttgtgaaaaattttgcacaaattgcagcccctcttattaacctta ccaggaagaatgtgagtttccattggacagatgagtgtcagaaatccataaagaaactgaaagagattttgacaggacca gaaatcatggccttcccaaatgatactggtacatatatattgaatacagatgccagtaacaccagcattgggagtgttct atcacagatacaaaatggacaggagcgtgtgattgctgatgcaagtagagccatgaacaagtccgagaaaaactactgtg tgacagataaagaactcttggctgtacgttattttattgaatacttcaggcaatacttactaggacgaaaatttgttgta cgtacagatcaccaggccatagtatggttatacaaattcaaggaaccaaaaggtcgaatcgcccgttggattgaaatcct ctcttctttcaactttgttatggaatataggccatgcaacaagcattcaaatgctgattcactttctagatgtaagaatc caactgattgtcaatgcccagagatagataatgaaggaagtctgaaatgtggaccatgtcccaagtgtaagagacgacta gtaggggttcctgaacctacctttgttagacgacctcggaagactgatagttcatttgcaactaaggcagtaaaaaccag gtctcatgtagaaaaagatgcaacattttggacaacaattagtggcaccgacgtaacaaaaatgcaaccgctacagaatg aagacccggatattaaaccagtgtaccagtggaaactacaggaaactaaacccagtaaggctgaacttgccatgcaaagc cctgctactagacactactgcttaatgtgggaatccctagaattacaaaataatgtattcgtgaaaattcaccctaacaa ggaggggttgggagatgatacacagcttatcacacctaagaagcttcagcaagccattttgttctacaatcacgattcaa tgatgtcgggtcacttaggagacaacagaacttggaagaaacccgtgccaaattttactggcagggaagtttgcctccca gtagatatcatatttggtcaaccaaagcttcatgagaacaatatagtatcaaagggaagttacctccaagatctccgtga aaagttgaataaagcccatgtaatagccaggaaacatctccagcagtctgcaaattaccacaagtgtcgctatgatcaaa aggcgtccataacaccatatcacccaggtgattatatgttgtacctgcatgaagagagaaaagaaggggagagtagtaag ctaaaaattccagctaaacgtggactactgtatagatgtctgccatgtggatacagaggggagagggccaggaccctgag gcattatgtttcagaacatgtcatggtggattgtgtacctttcgcatgttccctgtgcaattgtaaagcatatgatgaag ctggtattgcaaatcatctaggatggtaccaaaaacacttaaggattgccagaaaaaccaacccagaaagtccactcatt gtagcgtgggagattgtgaagtctggcaccccttacgtcattaactttatgactgatgtagttgcttgcacccaagtgga gagtacccttgcgtgggccattcggaagagggtgacggtccctgatgaagttattaaggcagtagtggaccatcgagaag ttgtactttctcattccagtagaaacctcgttcagctgactcttgttgaagagccagtatcaactatgtctgttgtctgt gaaagtatgtctgatcctgtccagtcttcgtgctgtattgtttcgtcaactgtatcgtcatgtgatgtctcaacccctgc tgaatgtactgttacatctgttttaccaactgttgtatcgtccatcatttcacctgtgccatccaccattgtatcgtcca gtgtgccagtaagcagtgccgtttcgtctcctgtaccgtcttgtgttccaggcgctgaaactattgtagaagatataaat gaacaattattaccatctggagaggagaacgaaatggaagaagaagaagaagaaataataaaaccgaagaaaaagagaca acgaagaaaatccacctcatcatcttcatcatcgtcatcatcatcatctgcagagacaacacctgaactattacagcaat ttaaggaaatgtcagatagaataaggagtgccggttttgacacggcgtatgaaatgcgaaggattgaccagaagattaca gaatcaaacctacttcttaaagagcaaaatagccttctgaaagaacttgacaacttactgaagagacaacagggaccacc acgacgtgtaacacctgcccctatgcgcccgagcatccatccaaagattgaaatggatcaacagaatttctatagagagg ggcacactgtacgcaaagatggcgaaatagaatttgaaatgttaacaattgacggtattgcactacctgagttcccacct gctagacaacctgggggataccctaaaagactaaacgagattatcaaaatggatacacgaccggatgacattatacttgc aacttatcctaaaaacggaacccactggatgagtgaaattttagatatgttagtaagagggagtgctgactattcaaagg agaaattagtcaaacttatggaatctctacccgatatggagatgatctataaccttcagtcaccaagaatactaaacaca catttaccctataaatggtttccacggaaacatattcagaatggaggaaaaatagtacactgtgcaagaaatccaaaaga tacgtacgtttccttttatcatcattgctcagcaggaatggaacttggaccaaagacaaagggaatgacatggacacagt ttttcgataactgtgttataggaaagggtaaagttgaaattttgatatacgatccagccaaggaaataaaagcccttgca gccttccttgaacttaacgtttcggacgagctattaaaggacattacagataaatgtctattcgaaaacctcaaaaaagt gtatgaagaagaaaaagaatatccacaggaaattcaaaagatgatccaaagacttagtgaaatgtcgccagattttaaac atccaaacatattcagaaaagatcaactgagtttacgtgactgggatcacacggatccagcagcgttaaccagtgtagta gaagagctgctgcagctctatagggactaccagctcagacagatagaagcttactccaggctgaccctgcagctcaactc catgctagaggatcaaagtacgacaaaaatagatagccaggatgtggagatattcctatatatagcagagacaaagttag gacctgttaatttcttgataaagttacctgtggattatacccaaattccagcttatgttaccaag |
|
Protein
| Protein ID | pfu_aug2.0_1325.1_18266.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1325.1_18266.t1 MSKRRSTESPRRPESEVTMTWSDQELSARQQTDYDSSGSLETNNCGVQGQITQIQPHAVHKMPFATDPAVSSFQHGQITP MSASNFQHGQITPTSVSSFQHWQITLMSASNFQHGQITPMSVSNFQQDKLTPKLDSKNTTRNKDHRTTPVRRIKLERNLC KDKKLLTSDAELPTHLLKLYDDAGPTSSDHEKREIAQLLLRNQHVFSEHEFDLGFTPLGEHAIDTGVHKPVKQPPRRVPH AMANEEKESIEKLDEQGIIKKSTSPLASPVVLVRKKSGGLRVCIDYRKLNALTLKDAFPLPRIQDYLDVVSGACLFSTFD LTSGYHQVPVKQSDQAKTAFVTKYGLYEYTSMPFSLTNAPVTFQRIMEIALSGLQWVTCLIYLDDVVCFNEVCFLGHIVN KNGVKPNPDNTVKIQNWPTPKTVTEVRQFLGMASYNRRFVKNFAQIAAPLINLTRKNVSFHWTDECQKSIKKLKEILTGP EIMAFPNDTGTYILNTDASNTSIGSVLSQIQNGQERVIADASRAMNKSEKNYCVTDKELLAVRYFIEYFRQYLLGRKFVV RTDHQAIVWLYKFKEPKGRIARWIEILSSFNFVMEYRPCNKHSNADSLSRCKNPTDCQCPEIDNEGSLKCGPCPKCKRRL VGVPEPTFVRRPRKTDSSFATKAVKTRSHVEKDATFWTTISGTDVTKMQPLQNEDPDIKPVYQWKLQETKPSKAELAMQS PATRHYCLMWESLELQNNVFVKIHPNKEGLGDDTQLITPKKLQQAILFYNHDSMMSGHLGDNRTWKKPVPNFTGREVCLP VDIIFGQPKLHENNIVSKGSYLQDLREKLNKAHVIARKHLQQSANYHKCRYDQKASITPYHPGDYMLYLHEERKEGESSK LKIPAKRGLLYRCLPCGYRGERARTLRHYVSEHVMVDCVPFACSLCNCKAYDEAGIANHLGWYQKHLRIARKTNPESPLI VAWEIVKSGTPYVINFMTDVVACTQVESTLAWAIRKRVTVPDEVIKAVVDHREVVLSHSSRNLVQLTLVEEPVSTMSVVC ESMSDPVQSSCCIVSSTVSSCDVSTPAECTVTSVLPTVVSSIISPVPSTIVSSSVPVSSAVSSPVPSCVPGAETIVEDIN EQLLPSGEENEMEEEEEEIIKPKKKRQRRKSTSSSSSSSSSSSAETTPELLQQFKEMSDRIRSAGFDTAYEMRRIDQKIT ESNLLLKEQNSLLKELDNLLKRQQGPPRRVTPAPMRPSIHPKIEMDQQNFYREGHTVRKDGEIEFEMLTIDGIALPEFPP ARQPGGYPKRLNEIIKMDTRPDDIILATYPKNGTHWMSEILDMLVRGSADYSKEKLVKLMESLPDMEMIYNLQSPRILNT HLPYKWFPRKHIQNGGKIVHCARNPKDTYVSFYHHCSAGMELGPKTKGMTWTQFFDNCVIGKGKVEILIYDPAKEIKALA AFLELNVSDELLKDITDKCLFENLKKVYEEEKEYPQEIQKMIQRLSEMSPDFKHPNIFRKDQLSLRDWDHTDPAALTSVV EELLQLYRDYQLRQIEAYSRLTLQLNSMLEDQSTTKIDSQDVEIFLYIAETKLGPVNFLIKLPVDYTQIPAYVTK |
|