Gene
| Gene Model ID | pfu_aug2.0_1326.1_21546 |
|---|---|
| Locus | scaffold1326.1 : 94963 ... 105775 : - |
| To GenomeBrowser | scaffold1326.1:94963..105775 |
| Genes list of scaffold | scaffold1326.1 |
| Synonym | pfu_aug1.0_6114.1_59939 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| coenzyme q-binding protein coq10 homolog mitochondrial | GO:0005739 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1326.1_21546.t1 | 1 | 1 | Polyketide_cyc | 83 | 210 | 2.3e-23 | 82.6 | 2.0e-27 | 3.0e-23 | 82.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1326.1_21546.t1 | gi|524864386|ref|XP_005089030.1| | PREDICTED: coenzyme Q-binding protein COQ10 homolog B, mitochondrial-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1326.1_21546.t1 | gi|90111995|sp|Q3THF9.1|CQ10B_MOUSE | Coenzyme Q-binding protein COQ10 homolog B, mitochondrial | 0.0 |
| pfu_aug2.0_1326.1_21546.t1 | gi|591355261|ref|XP_007071936.1| | PREDICTED: coenzyme Q-binding protein COQ10 homolog B, mitochondrial [Chelonia mydas] | 0.0 |
| pfu_aug2.0_1326.1_21546.t1 | gi|585723262|ref|XP_006903335.1| | PREDICTED: coenzyme Q-binding protein COQ10 homolog B, mitochondrial [Elephantulus edwardii] | 0.0 |
| pfu_aug2.0_1326.1_21546.t1 | gi|89337274|ref|NP_001034799.1| | coenzyme Q-binding protein COQ10 homolog B, mitochondrial isoform 1 [Mus musculus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1326.1_21546.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1326.1_21546.t1 atggcggcggtcaggcgatttaatcatactggtaggggagttttgaagtgtataaaaaagacaaatgaaaacaaaaagat aataaacagaggatgtattctataccatgtcccacagtcacatgttgtggtcccccaccaaacactacagacctctcagc catgcagtgggctgttcaacatccccaagccaattaatcccctcgccaagggcaaaagacaggagtattcagagaggcgg atactgggatacagcatggaccaaatgtacgagattgtttcggatgtagaactttacaaggaatttgtaccgtggtgtaa ggactctatggtttttaacaggagacctaaccatctcaaatgtaaattggaagtgggatttcctccattattagaacgat atacatcattagttacgttagcaagaccaaatctcgtgaagtcagaatgcacggaaggtaaactttttaaccacatgctg acaatatggcgattcagtccagggttgccgggacaacctaacacctgtacattagatttctcaatttcgtttgaattccg ctatgctatacacagtcagatgagcacgatgttctttgatcaagttgtaaagacaatggtttccgcattcttaaaacgtg ctaaaaaagtgtacggacccgaatccatgaaaagtcgacaaatcaatgtacgcatgctccaacacgtcaagttttag |
|
Protein
| Protein ID | pfu_aug2.0_1326.1_21546.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1326.1_21546.t1 MAAVRRFNHTGRGVLKCIKKTNENKKIINRGCILYHVPQSHVVVPHQTLQTSQPCSGLFNIPKPINPLAKGKRQEYSERR ILGYSMDQMYEIVSDVELYKEFVPWCKDSMVFNRRPNHLKCKLEVGFPPLLERYTSLVTLARPNLVKSECTEGKLFNHML TIWRFSPGLPGQPNTCTLDFSISFEFRYAIHSQMSTMFFDQVVKTMVSAFLKRAKKVYGPESMKSRQINVRMLQHVKF |
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