Gene
| Gene Model ID | pfu_aug2.0_1326.1_21548 |
|---|---|
| Locus | scaffold1326.1 : 116546 ... 120723 : + |
| To GenomeBrowser | scaffold1326.1:116546..120723 |
| Genes list of scaffold | scaffold1326.1 |
| Synonym | pfu_aug1.0_89188.1_13420 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1326.1_21548.t1 | 4 | 1 | HEAT | 9 | 25 | 1.5e-06 | 27.7 | 0.053 | 98.0 | 3.4 |
| pfu_aug2.0_1326.1_21548.t1 | 4 | 2 | HEAT | 32 | 60 | 1.5e-06 | 27.7 | 0.063 | 120.0 | 3.2 |
| pfu_aug2.0_1326.1_21548.t1 | 4 | 3 | HEAT | 74 | 102 | 1.5e-06 | 27.7 | 2.1e-05 | 0.038 | 14.0 |
| pfu_aug2.0_1326.1_21548.t1 | 4 | 4 | HEAT | 245 | 264 | 1.5e-06 | 27.7 | 0.3 | 550.0 | 1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1326.1_21548.t1 | gi|676430960|ref|XP_009046097.1| | hypothetical protein LOTGIDRAFT_199416 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1326.1_21548.t1 | gi|524900064|ref|XP_005106457.1| | PREDICTED: splicing factor 3B subunit 1-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1326.1_21548.t1 | gi|260800327|ref|XP_002595085.1| | hypothetical protein BRAFLDRAFT_90195 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1326.1_21548.t1 | gi|642934612|ref|XP_008197738.1| | PREDICTED: splicing factor 3B subunit 1 isoform X2 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1326.1_21548.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1326.1_21548.t1 atgcgtccagacattgacaacttggacgagtacgtccgtaacaccacagccagagcgttcgctgtcgtcgcctcagctct tggaatcccctccctcctgcccttccttaaggctgtttgtaagagtaagaagtcctggcaggccagacatactggtataa agatcgtacaacaaatcgctattttgatgggctgtgccatccttccacatcttaaaagcttggtggaaattattgaacac ggtttggtagatgagcagcagaaggtgcgtaccatcacagctttagccctggctgcgttagccgaggcagccacacccta cggtattgagtcctttgacagcgtgctcaagcccctatggaagggtatccgacagcacaggggtaagggactggcggctt tccttaaggccattggttacctgattccactgatggacgcagagtacgctaactactataccagggaagtcatgttgatc ctgattcgagagttccagtctcctgacgaggaaatgaagaaaattgtcctcaaggtagtaaaacagtgttgtgccacaga tggtgtggagccacagtacatcaaggacgagattttaccgccatttttcaaacatttctggaatcagaggatggctctcg acaggagaaattacagacagctggttgacacaacagttgagatagcaaataaagtaggggcggcagaaattgtcggcagg atcgtagacgatctgaaagatgaagctgagcagtacagaaagatggtgatggaaaccatagagaagatcatgggtaatct tggcgcggcagacatcgactcacggctggaagaacaacttattgacggtatcttatacgccttccaggaacagaccactg aggtaagtgtttcacgtgtgtaa |
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Protein
| Protein ID | pfu_aug2.0_1326.1_21548.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1326.1_21548.t1 MRPDIDNLDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLKSLVEIIEH GLVDEQQKVRTITALALAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLI LIREFQSPDEEMKKIVLKVVKQCCATDGVEPQYIKDEILPPFFKHFWNQRMALDRRNYRQLVDTTVEIANKVGAAEIVGR IVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDSRLEEQLIDGILYAFQEQTTEVSVSRV |
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