Gene
| Gene Model ID | pfu_aug2.0_1326.1_21551 |
|---|---|
| Locus | scaffold1326.1 : 130896 ... 146579 : + |
| To GenomeBrowser | scaffold1326.1:130896..146579 |
| Genes list of scaffold | scaffold1326.1 |
| Synonym | pfu_aug1.0_11133.1_32027 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| homeobox protein | GO:0003677 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1326.1_21551.t1 | 1 | 1 | Homeobox | 70 | 115 | 2.9e-13 | 49.1 | 3.9e-17 | 5.7e-13 | 48.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1326.1_21551.t1 | gi|242008553|ref|XP_002425067.1| | homeobox protein arx, putative [Pediculus humanus corporis] | 4.0e-24 |
| pfu_aug2.0_1326.1_21551.t1 | gi|156356366|ref|XP_001623896.1| | predicted protein [Nematostella vectensis] | 4.0e-23 |
| pfu_aug2.0_1326.1_21551.t1 | gi|744584396|ref|XP_010985017.1| | PREDICTED: homeobox protein ARX, partial [Camelus dromedarius] | 2.0e-21 |
| pfu_aug2.0_1326.1_21551.t1 | gi|662210074|ref|XP_008478660.1| | PREDICTED: retinal homeobox protein Rx1-like [Diaphorina citri] | 5.0e-21 |
| pfu_aug2.0_1326.1_21551.t1 | gi|562860330|ref|XP_006158552.1| | PREDICTED: homeobox protein ARX [Tupaia chinensis] | 6.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_1326.1_21551.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1326.1_21551.t1 atgaaacgctacggtccgaacagaaatctgacagtagaggaccccccgaagcaggattccgagactggcggtggcggtca gtctggacaatgtgacgtcacacaggagtaccacgagtacccggacaatgatcaggaaccatatggtggaattggtgcta gtaacacggggaatggtagcaaagccgcttgtggcaaaagaaaacagagaagataccggacgacgttcacaagttatcaa cttgacgagttggagaaagcgttcctgaaaactcactaccctgatgtattctacagagaggaacttgctctaaaaataga tcttacagaggccagagtccagaacaacgtgcagttcatagttttgtatgcgactatcaggtcaaacaaaggagggatct ccaataacaccaggctgcagcacccacagcaaaacccaaaaacacccaatgcaaaaatacagagcacacaagcacaggaa gagacgcataagggacaaggaacgtcatcttacaacacagaaacatcaaacacaaaggactacaataaaccaacgagacc aataggcaaccgatgccgacttagcacggccatctgccatggaaaaatcagcaggtgtggttgtcctggattacgtgctc acaaccctctcacttttccgattacccagaggtctggaagaacgcacaattgtggtgtaaaacaacctcctcattgtcag atgaatacacacaaacaagaccgcaaaacgcaggggcccaagcaacacagatga |
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Protein
| Protein ID | pfu_aug2.0_1326.1_21551.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1326.1_21551.t1 MKRYGPNRNLTVEDPPKQDSETGGGGQSGQCDVTQEYHEYPDNDQEPYGGIGASNTGNGSKAACGKRKQRRYRTTFTSYQ LDELEKAFLKTHYPDVFYREELALKIDLTEARVQNNVQFIVLYATIRSNKGGISNNTRLQHPQQNPKTPNAKIQSTQAQE ETHKGQGTSSYNTETSNTKDYNKPTRPIGNRCRLSTAICHGKISRCGCPGLRAHNPLTFPITQRSGRTHNCGVKQPPHCQ MNTHKQDRKTQGPKQHR |
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