Gene
| Gene Model ID | pfu_aug2.0_133.1_10324 |
|---|---|
| Locus | scaffold133.1 : 183094 ... 194236 : + |
| To GenomeBrowser | scaffold133.1:183094..194236 |
| Genes list of scaffold | scaffold133.1 |
| Synonym | pfu_aug1.0_3717.1_01521 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| chromodomain y-like protein 2 | GO:0003824 GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_133.1_10324.t2 | 1 | 1 | Chromo | 2 | 49 | 1.3e-13 | 50.3 | 4.4e-17 | 3.3e-13 | 49.1 |
| pfu_aug2.0_133.1_10324.t2 | 2 | 1 | ECH | 225 | 255 | 2.0e-31 | 108.9 | 1.7 | 13000.0 | -5.0 |
| pfu_aug2.0_133.1_10324.t2 | 2 | 2 | ECH | 519 | 701 | 2.0e-31 | 108.9 | 2.7e-35 | 2.0e-31 | 108.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_133.1_10324.t2 | gi|524875431|ref|XP_005094443.1| | PREDICTED: chromodomain Y-like protein-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_133.1_10324.t2 | gi|676450500|ref|XP_009052398.1| | hypothetical protein LOTGIDRAFT_115490 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_133.1_10324.t2 | gi|585713976|ref|XP_006825184.1| | PREDICTED: chromodomain Y-like protein 2-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_133.1_10324.t2 | gi|115770403|ref|XP_781347.2| | PREDICTED: chromodomain Y-like protein [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_133.1_10324.t2 | gi|560915493|ref|XP_006184003.1| | PREDICTED: chromodomain Y-like protein 2 [Camelus ferus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_133.1_10324.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_133.1_10324.t1 atggtagagcaactcctggaaagtgcagttgttgatgagcagacctactactttgtaagatggaaaggattttcatcaga ttgggacacatgggaacctttagaaaatttggcagattgccaagatctgattaagaaattccagtccgcggtgaagaaag ttcagggatcaaaaagtcctcaaaaagatggtacggccaaaaagagtcccgataaaaaggatggcggcataaaaaatagc acaaaggtggacgctattaatgatgggaaagttaaaggaacgcctaaaaagaaagagaagaaagaatcaccgaaagcagt taagtcttcaaagaagtcgcctcaaaaaaaggaagtagaaaaagcatcaccagcggaaaaagaaagtaagacggggaaca aaaaatctagtccatcaaagaacgagaaggcaaaatctcaaaaagtcaccaaaaagacagagagtaaggatgtggctgag gaaggaaaaggcaagaaaaaaattaagaatgtcaaaggcaaggttcagttcaaacccatcaaaggacagaaattgaaagt gaaaattatgaaaccaacaaagaaagatctggaaaagatgacttttttcactcctaaggctgctaaaaaagagatgaaaa gtgatgaatcttctagtatgtcggattcttcaactaaatctaataaggatttgaagaaaaacgtgaaagcaaacagaact acacaaaagaatacaaataaacagaaagcaacgtcagaaaagcagacagcgacaaaatctgtcgcaaaagtaaaatctcc aaagaagagaaaggcagaggaaaacgaagagctcttggacgtgactttaatatcagacagtgatagtgaaaatgaaactc tttattcgttatcggtgaaatcaaaaaagacaaaaaccgataagtcatctagtcctaaatcaaaggcagctacttcggca gcaaaatcatcaggggaaacacctaaaaaaggatctccgaagtccaaatcagcagcaagcgcaagtgctaagggaacgtc tggcaatcttacagtggaatcggtaaaaaggaaactggaggtcaaggccatcagagtaaagccattcagtccctctaacg ataaatctcctccaagctcctcaaagaagaagatgcgactaatcgacagtatgagagacaaaactattgccaatggtagg tatctgaattcaaagaagtttaaaaagcaagttaattaa |
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| Transcript ID | pfu_aug2.0_133.1_10324.t2 |
| Definition | - |
>pfu_aug2.0_133.1_10324.t2 atggtagagcaactcctggaaagtgcagttgttgatgagcagacctactactttgtaagatggaaaggattttcatcaga ttgggacacatgggaacctttagaaaatttggcagattgccaagatctgattaagaaattccagtccgcggtgaagaaag ttcagggatcaaaaagtcctcaaaaagatggtacggccaaaaagagtcccgataaaaaggatggcggcataaaaaatagc acaaaggtggacgctattaatgatgggaaagttaaaggaacgcctaaaaagaaagagaagaaagaatcaccgaaagcagt taagtcttcaaagaagtcgcctcaaaaaaaggaagtagaaaaagcatcaccagcggaaaaagaaagtaagacggggaaca aaaaatctagtccatcaaagaacgagaaggcaaaatctcaaaaagtcaccaaaaagacagagagtaaggatgtggctgag gaaggaaaaggcaagaaaaaaattaagaatgtcaaaggcaaggttcagttcaaacccatcaaaggacagaaattgaaagt gaaaattatgaaaccaacaaagaaagatctggaaaagatgacttttttcactcctaaggctgctaaaaaagagatgaaaa gtgatgaatcttctagtatgtcggattcttcaactaaatctaataaggatttgaagaaaaacgtgaaagcaaacagaact acacaaaagaatacaaataaacagaaagcaacgtcagaaaagcagacagcgacaaaatctgtcgcaaaagtaaaatctcc aaagaagagaaaggcagaggaaaacgaagagctcttggacgtgactttaatatcagacagtgatagtgaaaatgaaactc tttattcgttatcggtgaaatcaaaaaagacaaaaaccgataagtcatctagtcctaaatcaaaggcagctacttcggca gcaaaatcatcaggggaaacacctaaaaaaggatctccgaagtccaaatcagcagcaagcgcaagtgctaagggaacgtc tggcaatcttacagtggaatcggtaaaaaggaaactggaggtcaaggccatcagagtaaagccattcagtccctctaacg ataaatctcctccaagctcctcaaagaagaagatgcgactaatcgacagtatgagagacaaaactattgccaatgttatt cgtcctgtttctcccactcctgtcttcacatcattcagacccatcggtactacaaaccacactgctggcatcaccatggc aacagcttcagggtcgtcagctacaccaatagaaatcggcgatgttcccgtttaccatttcacgccttcacaattaccca tcagcccctcttccatgtcctacaagtccattcttgataatttgccgtcacaagccccgcctaagaagccgagtagaaat tacagtcaagacgacgactctgaacgagtagaaagaaggatcagtgtcagacagagtgaatgtgccttcagatacaaaga aatagtggtgcgtaaatgtcagagatacacccagatctggctcaacacacagaccaaactcaagaatgcccttaatcctc aggtgatccaagaatttgtgtctgccttaaattctgctaagtatgatgacagcacactggtgatgtacagtggactgggg aacgtgttctgtagcggaatcgatctcaacttcttgatctcaggggagaggaaagtggcggtacgacagatggtcgacgc tctcagagatttcaccaaagcactaattaccttccctaagcctatagtagctgttgctaatggtccggctatagggctag gtatgaccatgttaccgttatgtgacatcgtgtatgccagcgacaaggccacattttatctgccgtattctcagctgtct cagactccggagggatgtgcctcgtatactctgccactgtctgtaggaatggctatggctaatgagctgttgataggagg aagaaggatcacagctatagaggcgtgtaacttaggtcttgtctctcaggttttctggccgaccagtatgatgcaagaag tcataccaaaagtacagagtattgctctaaactctgctaagccgtaa |
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Protein
| Protein ID | pfu_aug2.0_133.1_10324.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_133.1_10324.t1 MVEQLLESAVVDEQTYYFVRWKGFSSDWDTWEPLENLADCQDLIKKFQSAVKKVQGSKSPQKDGTAKKSPDKKDGGIKNS TKVDAINDGKVKGTPKKKEKKESPKAVKSSKKSPQKKEVEKASPAEKESKTGNKKSSPSKNEKAKSQKVTKKTESKDVAE EGKGKKKIKNVKGKVQFKPIKGQKLKVKIMKPTKKDLEKMTFFTPKAAKKEMKSDESSSMSDSSTKSNKDLKKNVKANRT TQKNTNKQKATSEKQTATKSVAKVKSPKKRKAEENEELLDVTLISDSDSENETLYSLSVKSKKTKTDKSSSPKSKAATSA AKSSGETPKKGSPKSKSAASASAKGTSGNLTVESVKRKLEVKAIRVKPFSPSNDKSPPSSSKKKMRLIDSMRDKTIANGR YLNSKKFKKQVN |
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| Protein ID | pfu_aug2.0_133.1_10324.t2 |
| Definition | - |
>pfu_aug2.0_133.1_10324.t2 MVEQLLESAVVDEQTYYFVRWKGFSSDWDTWEPLENLADCQDLIKKFQSAVKKVQGSKSPQKDGTAKKSPDKKDGGIKNS TKVDAINDGKVKGTPKKKEKKESPKAVKSSKKSPQKKEVEKASPAEKESKTGNKKSSPSKNEKAKSQKVTKKTESKDVAE EGKGKKKIKNVKGKVQFKPIKGQKLKVKIMKPTKKDLEKMTFFTPKAAKKEMKSDESSSMSDSSTKSNKDLKKNVKANRT TQKNTNKQKATSEKQTATKSVAKVKSPKKRKAEENEELLDVTLISDSDSENETLYSLSVKSKKTKTDKSSSPKSKAATSA AKSSGETPKKGSPKSKSAASASAKGTSGNLTVESVKRKLEVKAIRVKPFSPSNDKSPPSSSKKKMRLIDSMRDKTIANVI RPVSPTPVFTSFRPIGTTNHTAGITMATASGSSATPIEIGDVPVYHFTPSQLPISPSSMSYKSILDNLPSQAPPKKPSRN YSQDDDSERVERRISVRQSECAFRYKEIVVRKCQRYTQIWLNTQTKLKNALNPQVIQEFVSALNSAKYDDSTLVMYSGLG NVFCSGIDLNFLISGERKVAVRQMVDALRDFTKALITFPKPIVAVANGPAIGLGMTMLPLCDIVYASDKATFYLPYSQLS QTPEGCASYTLPLSVGMAMANELLIGGRRITAIEACNLGLVSQVFWPTSMMQEVIPKVQSIALNSAKP |
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