Gene
| Gene Model ID | pfu_aug2.0_133.1_10326 |
|---|---|
| Locus | scaffold133.1 : 214414 ... 216151 : + |
| To GenomeBrowser | scaffold133.1:214414..216151 |
| Genes list of scaffold | scaffold133.1 |
| Synonym | pfu_aug1.0_3717.1_01523 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_133.1_10326.t1 | 3 | 1 | zf-B_box | 13 | 50 | 8.8e-10 | 38.3 | 4.2e-13 | 8.8e-10 | 38.3 |
| pfu_aug2.0_133.1_10326.t1 | 3 | 2 | zf-B_box | 119 | 125 | 8.8e-10 | 38.3 | 7.0 | 15000.0 | -4.4 |
| pfu_aug2.0_133.1_10326.t1 | 3 | 3 | zf-B_box | 446 | 453 | 8.8e-10 | 38.3 | 0.85 | 1800.0 | -1.1 |
Transcript
| Transcript ID | pfu_aug2.0_133.1_10326.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_133.1_10326.t1 atggcaactagtctatacaaggctcaattcgctctgaaaatatgtgaaaaccacgacaagaaggagcttcatgcttactg taaaacctgtgataaaaaagtatgtacgacatgtatcaaggaggagcattcttcacatgactgggaaactattacagaca tactgagggagaaaaaacacagtctaccggaggagtgtaaagaaatacgtgccgaaaaacttccgggtttaaaaaaggaa ttaaaccgcttcgagcgaaaaatacaagcggaagacacccgttttgatagaaacaaatcaattttgaatggttccagaca aagatacattgatggaatcaacaaattattcgatgacaaaatacatgtttgtcaacaaaaatccgaggctgcaaaacaaa gacataaagataaacacgaaggattgaaacagacagtagaatacctggatatggcgacgacagctctagacaaggatatc aatacattacctgatcatgacattctagacatggagaaggagatgagagatggactggaaaaggctctctcttacagtgc tgataagtacacgagtactacagtgtttgtacctgggcagatggatgtaaaggctcttgagaacatgattggtgaaatac acagcatgtctgtggtagaaatgaatgaaattgacagatactctgatgtcatatggtcagtaaaacctgtgtctgaaaca aacacctgggtatgtttcagcgatgataatcatccaaaattacttgatagatcaggagaggaacttaaagtaatgaaaac tcatggccgtgatcttatcacgtccagaagtgaagacattgttcttagtgaaggagagaaaggaatcatttcaattctaa ctcaagatgagaagacaataacaacatttgataccaaaccattatatcctaccttcatcagtaagacagagaatgacgac atactggttacactcgtggatggtgaccactacaacctagtaccgaccagccgccgtattgtccagcgtatgactctcac agggaaggtgcttcacacgtacgagttcagggaggatggtaagacaaggctgtttacatgtccgatcaagacagcggaga acaagaacagggacgtgtgtgttatcaactggctcagtgatgacagtggagaacttgtcgtactacataaagatggacgt gtgaagtttacgtatagaggagttggactggagtctaaaaagttcttaccatatgatgttgaatgtgatgtcaaatgtcg tattctgttgactgagcttcacagcagagcaatccacattctgagttctgaagggatgtatctatgtaaactatgtcagt atgaacaattactaccaactgggatatctatttacggtgataatctctggtgtgggtttcttgatggcaaagtgaaagtt tacaaatacacatgcatacacagttga |
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Protein
| Protein ID | pfu_aug2.0_133.1_10326.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_133.1_10326.t1 MATSLYKAQFALKICENHDKKELHAYCKTCDKKVCTTCIKEEHSSHDWETITDILREKKHSLPEECKEIRAEKLPGLKKE LNRFERKIQAEDTRFDRNKSILNGSRQRYIDGINKLFDDKIHVCQQKSEAAKQRHKDKHEGLKQTVEYLDMATTALDKDI NTLPDHDILDMEKEMRDGLEKALSYSADKYTSTTVFVPGQMDVKALENMIGEIHSMSVVEMNEIDRYSDVIWSVKPVSET NTWVCFSDDNHPKLLDRSGEELKVMKTHGRDLITSRSEDIVLSEGEKGIISILTQDEKTITTFDTKPLYPTFISKTENDD ILVTLVDGDHYNLVPTSRRIVQRMTLTGKVLHTYEFREDGKTRLFTCPIKTAENKNRDVCVINWLSDDSGELVVLHKDGR VKFTYRGVGLESKKFLPYDVECDVKCRILLTELHSRAIHILSSEGMYLCKLCQYEQLLPTGISIYGDNLWCGFLDGKVKV YKYTCIHS |
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