Gene
| Gene Model ID | pfu_aug2.0_133.1_10333 |
|---|---|
| Locus | scaffold133.1 : 371205 ... 379680 : - |
| To GenomeBrowser | scaffold133.1:371205..379680 |
| Genes list of scaffold | scaffold133.1 |
| Synonym | pfu_aug1.0_3238.1_30374 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| apolipoprotein d-like | GO:0005488 GO:0005576 GO:0044763 GO:0048523 GO:0051179 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_133.1_10333.t1 | 1 | 1 | Lipocalin_2 | 33 | 176 | 5.0e-27 | 94.4 | 1.7e-30 | 6.1e-27 | 94.1 |
| pfu_aug2.0_133.1_10333.t1 | 1 | 1 | Lipocalin | 40 | 179 | 8.5e-17 | 61.4 | 2.7e-20 | 1.0e-16 | 61.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_133.1_10333.t1 | gi|260821523|ref|XP_002606082.1| | hypothetical protein BRAFLDRAFT_125105 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_133.1_10333.t1 | gi|676493686|ref|XP_009066318.1| | hypothetical protein LOTGIDRAFT_197767 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_133.1_10333.t1 | gi|676493683|ref|XP_009066317.1| | hypothetical protein LOTGIDRAFT_134336 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_133.1_10333.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_133.1_10333.t1 atgctttcaatcgtactatgtgcgaccatttttggtcttgctaattctcaggttatcagtttcggtagctgtccgaaagt tcaagtaaaaagtacatttgatctcaaccagtatcttggcacgtggcatgagatatataaatttccagctattttcgaat ggaaccagaagtgtgttactgctaaatatagcctcaaatctgacggacacatcaaggtcgataactcaggggtaagaaat ggaaaaactgtacaagctattggtgatgcctacatacccaacacacagtctccctcaaaactcctagtcaaatttgcaca gtcgccagcttacggagattactgggtattggataccgactacaaaaactacacagttatctactcttgcggacctctcc ttggtttagggaaagtagaattcgcctgggtgctgagtcgccaacggacattggactcggcaactaaagacagactgttc aacatgatgaaaggttacggaatcgatgtcaaccatttcagtatggaggaccaaacaaactgctcataa |
|
Protein
| Protein ID | pfu_aug2.0_133.1_10333.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_133.1_10333.t1 MLSIVLCATIFGLANSQVISFGSCPKVQVKSTFDLNQYLGTWHEIYKFPAIFEWNQKCVTAKYSLKSDGHIKVDNSGVRN GKTVQAIGDAYIPNTQSPSKLLVKFAQSPAYGDYWVLDTDYKNYTVIYSCGPLLGLGKVEFAWVLSRQRTLDSATKDRLF NMMKGYGIDVNHFSMEDQTNCS |
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