Gene
| Gene Model ID | pfu_aug2.0_1330.1_01548 |
|---|---|
| Locus | scaffold1330.1 : 74056 ... 76283 : + |
| To GenomeBrowser | scaffold1330.1:74056..76283 |
| Genes list of scaffold | scaffold1330.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| atp-dependent dna helicase | GO:0006259 GO:0008026 GO:0097159 GO:1901363 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1330.1_01548.t1 | 1 | 1 | DEAD | 27 | 93 | 1.1e-07 | 31.5 | 2.8e-11 | 1.4e-07 | 31.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1330.1_01548.t1 | gi|585700819|ref|XP_006822762.1| | PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Saccoglossus kowalevskii] | 3.0e-20 |
| pfu_aug2.0_1330.1_01548.t1 | gi|585653113|ref|XP_006815053.1| | PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Saccoglossus kowalevskii] | 5.0e-20 |
| pfu_aug2.0_1330.1_01548.t1 | gi|585717411|ref|XP_006825696.1| | PREDICTED: ATP-dependent DNA helicase hus2/rqh1-like [Saccoglossus kowalevskii] | 8.0e-20 |
| pfu_aug2.0_1330.1_01548.t1 | gi|585652544|ref|XP_006814937.1| | PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Saccoglossus kowalevskii] | 4.0e-19 |
| pfu_aug2.0_1330.1_01548.t1 | gi|585691492|ref|XP_006821266.1| | PREDICTED: Werner syndrome ATP-dependent helicase homolog [Saccoglossus kowalevskii] | 5.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_1330.1_01548.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1330.1_01548.t1 atggagacacgtgctgacattatgaagaagtttaaagaaataaaagacttgtacggttttaatttcaatttaaaacaggg tcagctgcgtcttattgaagctattttaaataatagcgacgcagttggggtatttccaactgggtatggcaaaagtttat gttacactttgcctcctgtcctgaggaaacatgccggtacagacagatgcatttctctggtcatatccccccttaaatct atcatgtttgaccaatgcagagatttgaatagtcgaagtattccggcagtatgtgtcaagagcagatcagaaatggcttc tgacgatatagatggtgagtaa |
|
Protein
| Protein ID | pfu_aug2.0_1330.1_01548.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1330.1_01548.t1 METRADIMKKFKEIKDLYGFNFNLKQGQLRLIEAILNNSDAVGVFPTGYGKSLCYTLPPVLRKHAGTDRCISLVISPLKS IMFDQCRDLNSRSIPAVCVKSRSEMASDDIDGE |
|