Gene
| Gene Model ID | pfu_aug2.0_1330.1_01550 |
|---|---|
| Locus | scaffold1330.1 : 129266 ... 144759 : + |
| To GenomeBrowser | scaffold1330.1:129266..144759 |
| Genes list of scaffold | scaffold1330.1 |
| Synonym | pfu_aug1.0_5605.1_59819 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| growth hormone-inducible transmembrane | GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1330.1_01550.t1 | 1 | 1 | Bax1-I | 77 | 293 | 3.39997e-41 | 141.1 | 2.8026e-45 | 4.10006e-41 | 140.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1330.1_01550.t1 | gi|524884356|ref|XP_005098799.1| | PREDICTED: growth hormone-inducible transmembrane protein-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1330.1_01550.t1 | gi|387916062|gb|AFK11640.1| | Growth hormone-inducible transmembrane protein [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_1330.1_01550.t1 | gi|638245951|ref|NP_001279236.1| | growth hormone inducible transmembrane protein [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_1330.1_01550.t1 | gi|348508590|ref|XP_003441837.1| | PREDICTED: growth hormone-inducible transmembrane protein-like [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_1330.1_01550.t1 | gi|499020987|ref|XP_004561273.1| | PREDICTED: growth hormone-inducible transmembrane protein [Maylandia zebra] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1330.1_01550.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1330.1_01550.t1 atgttggctgcccgtttgtgccgcatcccgcttactgcgtttgttcccggagtaggaaaacagaccgtgaataaaccaac acaatgtatgtacacaagatttcaaacgttcagcaatgagacaggacccagggtgtcacgtagggtacagaagaaaggag gttcaactatcaaggaaaagttaatggcaccagctggggattcaggtcttctatggtcggaggaggtacgacagcgagtt cgttctacgtacatgtattttggggggagtgtaggacttactgcgttatcagctgtagccgtcagtaaatcaccagcact catgaatctcatgatgaaaaattcactcctggctattggtgctacgtttgctgtaatgatcggctctgggatggtactta ggtctattccgtacaaggagggactcgggaagaagcaactggcgtggatgacccactgtgggattatgggagctatcgtt gccccgctgacgatgcttggtggccctctcctggttagagccgcatggtatacagcaggaattgttggagggctgtcagc tgttgctatgtgtgctcccagtgagaagttcctgaacatgggtggacccctggcctgtggactgggcgtggtctttgttt cctctataggaagcatgttcttaccaccgacttcagcagtgggtgctggactatactccatcagtatttatggtggtctt gttttgtttggtcttttcctcttatacgacacacagaaagtaatcaaaaaggcagagacgcaccctgtatattcaccagt gccctttgaccctgtgaatgcttgcctaggaatctacatggacacgttaaatattttcatcagagtggcaatgattctgg ctaacgggggaggaagcaggcggaagtaa |
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Protein
| Protein ID | pfu_aug2.0_1330.1_01550.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1330.1_01550.t1 MLAARLCRIPLTAFVPGVGKQTVNKPTQCMYTRFQTFSNETGPRVSRRVQKKGGSTIKEKLMAPAGDSGLLWSEEVRQRV RSTYMYFGGSVGLTALSAVAVSKSPALMNLMMKNSLLAIGATFAVMIGSGMVLRSIPYKEGLGKKQLAWMTHCGIMGAIV APLTMLGGPLLVRAAWYTAGIVGGLSAVAMCAPSEKFLNMGGPLACGLGVVFVSSIGSMFLPPTSAVGAGLYSISIYGGL VLFGLFLLYDTQKVIKKAETHPVYSPVPFDPVNACLGIYMDTLNIFIRVAMILANGGGSRRK |
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