Gene
| Gene Model ID | pfu_aug2.0_1331.1_04972 |
|---|---|
| Locus | scaffold1331.1 : 83406 ... 88335 : + |
| To GenomeBrowser | scaffold1331.1:83406..88335 |
| Genes list of scaffold | scaffold1331.1 |
| Synonym | pfu_aug1.0_1777.1_08110 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1331.1_04972.t1 | 1 | 1 | PHD | 120 | 170 | 5.2e-07 | 29.2 | 4.3e-10 | 1.3e-06 | 28.0 |
| pfu_aug2.0_1331.1_04972.t1 | 1 | 1 | Exo_endo_phos | 238 | 375 | 2.1e-07 | 31.1 | 1.1e-10 | 3.3e-07 | 30.4 |
| pfu_aug2.0_1331.1_04972.t1 | 2 | 1 | Exo_endo_phos_2 | 331 | 445 | 2.4e-09 | 36.8 | 8.0e-13 | 2.4e-09 | 36.8 |
| pfu_aug2.0_1331.1_04972.t1 | 2 | 2 | Exo_endo_phos_2 | 497 | 523 | 2.4e-09 | 36.8 | 1.2 | 3600.0 | -2.5 |
Transcript
| Transcript ID | pfu_aug2.0_1331.1_04972.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1331.1_04972.t1 atgagagtaaagcccgatccgaaatccggaagtaaacaaaccatgtcaataaacagtgtactactagtgttctacattcc aatttttctcattatcgtcacccataatgaactacacagacgtccaaaccttagtatctcattatttacagaaaatccat gtcatctaaggtcaaatgatgccaatagtttggatttatcacaatattttcaggcaatcttgtacgttgacagattaaaa tcaccaagtaaaaagtttggtatgaataaacactgcatgctatatctatgtttcctaaatatattgcaagcaaatgactg tgaaatgaacccaggtccaagacgacccaagtggccctgccaggtgtgtaacaaggctgtgaaatgggaacaccgtgcca tactgtgtgataactgtgaaggttggtaccatacttcatgcatcaacatggcaagtgctgtatatcatggtctcgacaat agccatacatcttggatatgttgcacatgtggattaccaaactttagttcatctctctttcagtccactgacattttgac cttgtcaaacacttttgattcattggggaatagctcaatttcatcagagttaggagaacccattggtacatcatcaccta aacctagggataaccatcagagaacaaccgaacaagctgcaaataacagcaacttgaaagtattaacgatcaattttcaa agtattagatctaaacgtgaagctttttggaatttagtagaggattgcaacccagacataatattaggatgcgaaacatg gctctacccatctataggctcacatgaggtcatgcccccgggttatgatacttaccgtaaagacagaagtgatggatatg gaggcgttctcgtagctgtcaagtcaaactttagcagcagtcagattgacatgaacctgcagagcgagatggtagcagta catattactggtgagaaaaatacctccttagtagtaggatctttctatcgccaaccaaacagggaccctaatcatgctcg acaactctgtgatgatattacaaaaattgtcagagataatcagaaatccactatttggatagcaggggatgcaaatctac cagacatactatggaacacagacaccattaatggaaatcgttaccccacagaaataaatgaaagtttcttacaaatgaaa aatgatactggtctggaacaagtcatcacatttccaacaagggacaacaacatgttagagatatttctgaccaacaagcc cggactcatcaacagatgcacaccaataccaggcataagtgatcatgacactattgcgtacattgaagctagtgtgaaag caaaatataaacgaccaaccaaacggaagatttacctgtggaaaaaggcaaatgttgaagaactacacacagagatgcag aactttgccaacgaatttacaaccagatacaacaaaaacacagacgtaaacacactatggaacatctttgcagaggaaag cacacaacaaatgaacacccacataccaacaaaatggacatcagaacgttacagccaagtatggatcaacagagacataa agaaattaacaagaaggaagaaacacagttacaaacatgcaaaaagaacaggaaagaaaaaagattgggaacggttctac cagcttaaacgtcagacacagactacatgtaaacaagcatataacgattatattgccaacatgctagaggaggataatac caccaatccaaagaagttttggagtttcatcaaatgtaaaagatcagaaaacagtggagtgtctccattacgaaaggaag gcatattgtatagcgatccagttaacaaggcaaacatcttgaatgaccagtttgtgtctgtgtttacccaggaagatacg caccacatacctgacaaaggagacagcccatatcctgatctgccagagatcatcatccaccctgatggtgtgaggaaatt actgaaaaacatcaatcctcacaaggcaacagggccagacaacatcccaggtcagcttctcaaggaggttgcacaggagg tcacaccaatacttacccttatcttctcagcatctctgcaccagggtaggatacctgatgagtggaaagaagccacagag tactataaaatcgatatctttttgaaagatgacattatcatatttgagagaaaaccaggaaaacagggtgctctggaatt agtgaacaggacagaagatgtgacagaggatttgatccactggaatggcacattcaattaccagaaacagctggattga |
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Protein
| Protein ID | pfu_aug2.0_1331.1_04972.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1331.1_04972.t1 MRVKPDPKSGSKQTMSINSVLLVFYIPIFLIIVTHNELHRRPNLSISLFTENPCHLRSNDANSLDLSQYFQAILYVDRLK SPSKKFGMNKHCMLYLCFLNILQANDCEMNPGPRRPKWPCQVCNKAVKWEHRAILCDNCEGWYHTSCINMASAVYHGLDN SHTSWICCTCGLPNFSSSLFQSTDILTLSNTFDSLGNSSISSELGEPIGTSSPKPRDNHQRTTEQAANNSNLKVLTINFQ SIRSKREAFWNLVEDCNPDIILGCETWLYPSIGSHEVMPPGYDTYRKDRSDGYGGVLVAVKSNFSSSQIDMNLQSEMVAV HITGEKNTSLVVGSFYRQPNRDPNHARQLCDDITKIVRDNQKSTIWIAGDANLPDILWNTDTINGNRYPTEINESFLQMK NDTGLEQVITFPTRDNNMLEIFLTNKPGLINRCTPIPGISDHDTIAYIEASVKAKYKRPTKRKIYLWKKANVEELHTEMQ NFANEFTTRYNKNTDVNTLWNIFAEESTQQMNTHIPTKWTSERYSQVWINRDIKKLTRRKKHSYKHAKRTGKKKDWERFY QLKRQTQTTCKQAYNDYIANMLEEDNTTNPKKFWSFIKCKRSENSGVSPLRKEGILYSDPVNKANILNDQFVSVFTQEDT HHIPDKGDSPYPDLPEIIIHPDGVRKLLKNINPHKATGPDNIPGQLLKEVAQEVTPILTLIFSASLHQGRIPDEWKEATE YYKIDIFLKDDIIIFERKPGKQGALELVNRTEDVTEDLIHWNGTFNYQKQLD |
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