Gene
| Gene Model ID | pfu_aug2.0_1331.1_04973 |
|---|---|
| Locus | scaffold1331.1 : 89166 ... 99890 : + |
| To GenomeBrowser | scaffold1331.1:89166..99890 |
| Genes list of scaffold | scaffold1331.1 |
| Synonym | pfu_aug1.0_1777.1_08110 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| growth arrest-specific protein 2 | GO:0005856 GO:0006915 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1331.1_04973.t1 | 1 | 1 | CH | 53 | 170 | 8.8e-07 | 28.9 | 2.0e-10 | 1.5e-06 | 28.2 |
| pfu_aug2.0_1331.1_04973.t1 | 1 | 1 | GAS2 | 204 | 268 | 7.1e-18 | 64.1 | 2.2e-21 | 1.6e-17 | 62.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1331.1_04973.t1 | gi|524916772|ref|XP_005113156.1| | PREDICTED: growth arrest-specific protein 2-like, partial [Aplysia californica] | 0.0 |
| pfu_aug2.0_1331.1_04973.t1 | gi|390349922|ref|XP_780477.3| | PREDICTED: growth arrest-specific protein 2 isoform X1 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_1331.1_04973.t1 | gi|676445356|ref|XP_009050727.1| | hypothetical protein LOTGIDRAFT_57760, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1331.1_04973.t1 | gi|562835279|ref|XP_006146967.1| | PREDICTED: growth arrest-specific protein 2 [Tupaia chinensis] | 0.0 |
| pfu_aug2.0_1331.1_04973.t1 | gi|505799917|ref|XP_004607911.1| | PREDICTED: growth arrest-specific protein 2 [Sorex araneus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1331.1_04973.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1331.1_04973.t1 atgtcgaagaagagagagtcggggctgcctccctcttacacagcagaggcggggcttgttcctaacataagtaatggtat gcccaaagatgaggacgagtgtcaggtgtcgcagaaactagctgtactacaggaggaaagtctcaaacctataaaggaag atctggcagagtggatagccaaaacactggagatagacattacaccggacacatttttagacatattagataatggagtg tatttatgccagctagcaaagctgatacagaggaaagctgaggaatgtgtggctgatggttcatatactgagcctttacc tcaagtcaagttacggtgtaggaacaacgctgcatcagggagttggtttgcacgagataatgcagctaactttcttcact ggtgtaaggcatttggcatggcagatgatcagatgtttgaaacagaatatttagtgtctcacactggagagaagtcagtg ttgatgtgtatattggagctagccaggattgggtataagtttggcttggatcctcccaacctcatcagaatggagaagga gatagagaaagaggaggaggttcctgtcatagagcagcctaaacctactagtctggatgctgaggttcgaaggatagcct ttaagtgcaagtgccatgatcacgttaaaaaacttggtgaaggaaaatacctcatatttggcagagtggtgcaaatcagg tttttgaagaatcgtcacctgatggtgagagtgggtggaggatgggacacactggagaattatctagtacaccatacacc agtagaagtgttcgaacatcgccgacctgcaaccggcgatcctaaggacatagggaataaatatctgtacttcaagtcta aatataaatctcatgctcaggtggccaacggacactga |
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Protein
| Protein ID | pfu_aug2.0_1331.1_04973.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1331.1_04973.t1 MSKKRESGLPPSYTAEAGLVPNISNGMPKDEDECQVSQKLAVLQEESLKPIKEDLAEWIAKTLEIDITPDTFLDILDNGV YLCQLAKLIQRKAEECVADGSYTEPLPQVKLRCRNNAASGSWFARDNAANFLHWCKAFGMADDQMFETEYLVSHTGEKSV LMCILELARIGYKFGLDPPNLIRMEKEIEKEEEVPVIEQPKPTSLDAEVRRIAFKCKCHDHVKKLGEGKYLIFGRVVQIR FLKNRHLMVRVGGGWDTLENYLVHHTPVEVFEHRRPATGDPKDIGNKYLYFKSKYKSHAQVANGH |
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